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来自嗜热栖热菌OT3的古菌磷酸甘油酸变位酶PH0037的纯化、结晶及初步X射线晶体学分析。

Purification, crystallization and preliminary X-ray crystallographic analysis of the archaeal phosphoglycerate mutase PH0037 from Pyrococcus horikoshii OT3.

作者信息

Lokanath Neratur K, Kunishima Naoki

机构信息

Advanced Protein Crystallography Research Group, RIKEN SPring-8 Center, Harima Institute, 1-1-1 Kouto, Sayo-cho, Sayo-gun, Hyogo 679-5148, Japan.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 Aug 1;62(Pt 8):788-90. doi: 10.1107/S1744309106026121. Epub 2006 Jul 25.

Abstract

Phosphoglycerate mutases catalyze the interconversion of 2-phosphoglycerate and 3-phosphoglycerate in glycolysis and gluconeogenesis pathways. The archaeal phosphoglycerate mutase PH0037 from Pyrococcus horikoshii OT3 has been overexpressed in Escherichia coli and purified. Crystals were obtained using the oil-microbatch method at 291 K. A native data set extending to a resolution of 2.2 angstroms has been collected and processed in space group R32. Assuming the presence of a dimer in the asymmetric unit, the V(M) value is calculated to be 3.0 angstroms3 Da(-1), consistent with the dynamic light-scattering experiment result, which shows a dimeric state of the protein in solution. Molecular-replacement trials using the crystal structure of Bacilllus stearothermophilus phosphoglycerate mutase as a search model did not provide a satisfactory solution, indicating substantially different structures of these two phophoglycerate mutases.

摘要

磷酸甘油酸变位酶在糖酵解和糖异生途径中催化2-磷酸甘油酸和3-磷酸甘油酸的相互转化。来自嗜热栖热菌OT3的古生菌磷酸甘油酸变位酶PH0037已在大肠杆菌中过表达并纯化。在291 K下使用油微批量法获得了晶体。已收集并在空间群R32中处理了分辨率达到2.2埃的天然数据集。假设不对称单元中存在二聚体,计算出的V(M)值为3.0埃³ Da⁻¹,这与动态光散射实验结果一致,该结果表明该蛋白质在溶液中处于二聚体状态。使用嗜热栖热芽孢杆菌磷酸甘油酸变位酶的晶体结构作为搜索模型进行分子置换试验未得到满意的结果,表明这两种磷酸甘油酸变位酶的结构有很大差异。

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