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来自大肠杆菌K(-10)的L-苯丙氨酸:tRNA连接酶的活性位点化学计量

Active site stoichiometry of L-phenylalanine: tRNA ligase from Escherichia coli K(-10).

作者信息

Bartmann P, Hanke T, Holler E

出版信息

J Biol Chem. 1975 Oct 10;250(19):7668-74.

PMID:170267
Abstract

The existence of two active siter per molecule of L-phenylalanine:tRNA ligase from Escherichia coli K(-10) has been demonstrated by isolation of the E-aminoacyl adenylate and tel filtration and the nitrocellulose filter assay at pH 5.0 revealed the same stoichiometry for the E-tRNAPhe comples as protection against degradation by snake venom phosphodiesterase and equilibrium gel filtration at pH 7.5. Using a fluorescence titration technique, it was found that the dissociation constant for ligase-tRNAPhe complex is decreased 20-fold when the hydrogen ion concentration is changed from pH 6.0 to pH 5.0. The existence of two active sites binding the aminoacyl adenylate intermediate was demonstrated by gel filtration and retention on DEAE-cellulose filters. "Burst" experiments indicated that two sites were involved in a rapid ATP consumption at conditions of catalytic amino acid activation. Furthermore, it was observed that the activated amino acid could be transferred from both sites to cognate tRNA.

摘要

通过分离E-氨酰腺苷酸以及在pH 5.0条件下进行凝胶过滤和硝酸纤维素滤膜分析,已证明来自大肠杆菌K(-10)的L-苯丙氨酸:tRNA连接酶每个分子存在两个活性位点。该分析显示,E-tRNAPhe复合物的化学计量与在pH 7.5条件下防止蛇毒磷酸二酯酶降解和平衡凝胶过滤的情况相同。使用荧光滴定技术发现,当氢离子浓度从pH 6.0变为pH 5.0时,连接酶-tRNAPhe复合物的解离常数降低了20倍。通过凝胶过滤和在DEAE-纤维素滤膜上的保留,证明了存在两个结合氨酰腺苷酸中间体的活性位点。“爆发”实验表明,在催化氨基酸活化的条件下,两个位点都参与了快速的ATP消耗。此外,观察到活化的氨基酸可以从两个位点转移到同源tRNA上。

相似文献

1
Active site stoichiometry of L-phenylalanine: tRNA ligase from Escherichia coli K(-10).来自大肠杆菌K(-10)的L-苯丙氨酸:tRNA连接酶的活性位点化学计量
J Biol Chem. 1975 Oct 10;250(19):7668-74.
2
L-phenylalanine:tRNA ligase of Escherichia coli K10. A rapid kinetic investigation of the catalytic reaction.大肠杆菌K10的L-苯丙氨酸:tRNA连接酶。催化反应的快速动力学研究。
Biochemistry. 1975 Nov 4;14(22):4777-86. doi: 10.1021/bi00693a001.
3
Mechanism of discrimination between cognate and non-cognate tRNAs by phenylalanyl-tRNA synthetase from yeast.酵母苯丙氨酰 - tRNA合成酶区分同源和非同源tRNA的机制。
Eur J Biochem. 1976 Sep;68(1):81-93. doi: 10.1111/j.1432-1033.1976.tb10766.x.
4
Phenylalanyl-tRNA synthetase from E. coli MRE-600: analysis of the active site distribution on the enzyme subunits by affinity labelling.来自大肠杆菌MRE - 600的苯丙氨酰 - tRNA合成酶:通过亲和标记分析酶亚基上的活性位点分布。
Biochim Biophys Acta. 1985 Aug 8;830(2):206-12. doi: 10.1016/0167-4838(85)90029-9.
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Rearrangement of an abortive aminoacyl-tRNA synthetase complex with aminoacyl-tRNA could be rate-determining for catalytic charging.流产性氨酰-tRNA合成酶复合物与氨酰-tRNA的重排可能是催化性氨基酸加载的限速步骤。
J Biol Chem. 1976 Dec 10;251(23):7717-9.
6
Kinetics of acyl transfer ribonucleic acid complexes of Escherichia coli phenylalanyl-tRNA synthetase. A conformational change is rate limiting in catalysis.大肠杆菌苯丙氨酰 - tRNA合成酶的酰基转移核糖核酸复合物的动力学。催化过程中构象变化是限速步骤。
Biochemistry. 1982 May 11;21(10):2460-7. doi: 10.1021/bi00539a027.
7
Acceptor activity of tRNAPhe from yeasts under special conditions of aminoacylation.在特定氨酰化条件下酵母苯丙氨酸转运核糖核酸(tRNAPhe)的受体活性
Mol Biol (Mosk). 1976 Jul-Aug;10(4):663-7.
8
Phenylalanyl-tRNA synthetase from E. coli MRE-600: localization of the phenylalanine binding sites on the subunits by affinity reagents.来自大肠杆菌MRE - 600的苯丙氨酰 - tRNA合成酶:利用亲和试剂确定亚基上苯丙氨酸结合位点的位置。
Mol Biol Rep. 1982 Mar 31;8(2):123-6. doi: 10.1007/BF00778515.
9
L-Phenylalanine: tRNA ligase of Escherichia coli K10. The effect of O replaced by S substitution on substrate and ligand binding properties of ATP.L-苯丙氨酸:大肠杆菌K10的tRNA连接酶。ATP中氧被硫取代对底物和配体结合特性的影响。
Eur J Biochem. 1976 Aug 1;67(1):171-6. doi: 10.1111/j.1432-1033.1976.tb10646.x.
10
Affinity labelling of phenylalanyl-tRNA synthetase from E. coli MRE-600 by E. coli tRNAphe containing photoreactive group.含有光反应基团的大肠杆菌苯丙氨酰 - tRNA合成酶被大肠杆菌苯丙氨酰 - tRNA的亲和标记(来自大肠杆菌MRE - 600) 。
Nucleic Acids Res. 1976 Jun;3(6):1577-90. doi: 10.1093/nar/3.6.1577.

引用本文的文献

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Selection for active E. coli tRNA(Phe) variants from a randomized library using two proteins.使用两种蛋白质从随机文库中筛选活性大肠杆菌苯丙氨酸转运RNA(tRNA(Phe))变体。
EMBO J. 1993 Jul;12(7):2959-67. doi: 10.1002/j.1460-2075.1993.tb05958.x.
2
Phenylalanyl-tRNA synthetase from E. coli MRE-600: localization of the phenylalanine binding sites on the subunits by affinity reagents.来自大肠杆菌MRE - 600的苯丙氨酰 - tRNA合成酶:利用亲和试剂确定亚基上苯丙氨酸结合位点的位置。
Mol Biol Rep. 1982 Mar 31;8(2):123-6. doi: 10.1007/BF00778515.
3
The binding of adenosine(5')tetraphospho(5')adenosine to calf thymus histones measured by non-equilibrium dialysis.
通过非平衡透析法测定腺苷(5')四磷酸(5')腺苷与小牛胸腺组蛋白的结合。
Biochem J. 1987 Sep 15;246(3):681-6. doi: 10.1042/bj2460681.
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Aminoacyl-tRNA synthetases: affinity labeling of the ATP binding site by 2', 3' -ribose oxidized ATP.氨酰-tRNA合成酶:2',3'-核糖氧化型ATP对ATP结合位点的亲和标记
Proc Natl Acad Sci U S A. 1978 May;75(5):2088-92. doi: 10.1073/pnas.75.5.2088.