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脯氨酸两性离子在溶液、玻璃态和晶态中的动力学。

Proline zwitterion dynamics in solution, glass, and crystalline state.

作者信息

Kapitán Josef, Baumruk Vladimír, Kopecký Vladimír, Pohl Radek, Bour Petr

机构信息

Institute of Organic Chemistry and Biochemistry, Academy of Sciences, Flemingovo nam. 2, 16610, Prague 6, Czech Republic.

出版信息

J Am Chem Soc. 2006 Oct 18;128(41):13451-62. doi: 10.1021/ja062958l.

Abstract

Raman and Raman optical activity spectra of L- and D-proline zwitterionic (PROZW) forms were recorded for H(2)O and D(2)O solutions in a wide frequency range and analyzed with respect to the motion of the proline ring and rotation of the carbonyl group. The solution spectra were additionally compared to Raman scattering of glass and crystalline powder proline. Solution and glass spectral band broadenings are similar and reveal information about the extent of internal molecular motion. Two distinct but equally populated flexible forms were found in the glass and the solution. The equal population is consistent with NMR data, temperature, and concentration dependencies. The molecular flexibility is reduced significantly in the crystal, however, where only one conformer is present. Consequently, the crystal bands are narrow and exhibit minor frequency shifts. The spectra were interpreted with the aid of density functional theory computations involving both continuum and explicit solvent. A two-dimensional potential energy surface pertaining to the five-member ring puckering coordinates was constructed and used for dynamical averaging of spectral properties. Comparison of the computed and experimental bandwidths suggests that the puckering is strongly correlated with the carbonyl rotation. An averaging over these two motions produces similar results. The interpretation of the Raman experiments with the aid of the simulation techniques also indicates that the environment modulates properties of the hydrophobic part of the molecule indirectly by interacting with the ionic group. Such behavior may be important for the reactivity and biological activity of proline-containing peptides and proteins.

摘要

在很宽的频率范围内记录了L-和D-脯氨酸两性离子(PROZW)形式在H₂O和D₂O溶液中的拉曼光谱和拉曼光学活性光谱,并针对脯氨酸环的运动和羰基的旋转进行了分析。此外,还将溶液光谱与玻璃态和结晶态粉末脯氨酸的拉曼散射进行了比较。溶液和玻璃态的光谱带展宽相似,揭示了分子内运动程度的信息。在玻璃态和溶液中发现了两种不同但数量相等的柔性形式。数量相等与核磁共振数据、温度和浓度依赖性一致。然而,在晶体中分子柔性显著降低,其中只存在一种构象异构体。因此,晶体的谱带很窄,频率位移很小。借助涉及连续介质和显式溶剂的密度泛函理论计算对光谱进行了解释。构建了与五元环褶皱坐标相关的二维势能面,并用于光谱性质的动态平均。计算带宽与实验带宽的比较表明,褶皱与羰基旋转密切相关。对这两种运动进行平均会产生相似的结果。借助模拟技术对拉曼实验的解释还表明,环境通过与离子基团相互作用间接调节分子疏水部分的性质。这种行为可能对含脯氨酸的肽和蛋白质的反应性和生物活性很重要。

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