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欧洲人群亚结构:北方和南方人群的聚类

European population substructure: clustering of northern and southern populations.

作者信息

Seldin Michael F, Shigeta Russell, Villoslada Pablo, Selmi Carlo, Tuomilehto Jaakko, Silva Gabriel, Belmont John W, Klareskog Lars, Gregersen Peter K

机构信息

Rowe Program in Human Genetics, Departments of Biological Chemistry and Medicine, University of California Davis, Davis, California, United States of America.

出版信息

PLoS Genet. 2006 Sep 15;2(9):e143. doi: 10.1371/journal.pgen.0020143. Epub 2006 Jul 25.

DOI:10.1371/journal.pgen.0020143
PMID:17044734
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1564423/
Abstract

Using a genome-wide single nucleotide polymorphism (SNP) panel, we observed population structure in a diverse group of Europeans and European Americans. Under a variety of conditions and tests, there is a consistent and reproducible distinction between "northern" and "southern" European population groups: most individual participants with southern European ancestry (Italian, Spanish, Portuguese, and Greek) have >85% membership in the "southern" population; and most northern, western, eastern, and central Europeans have >90% in the "northern" population group. Ashkenazi Jewish as well as Sephardic Jewish origin also showed >85% membership in the "southern" population, consistent with a later Mediterranean origin of these ethnic groups. Based on this work, we have developed a core set of informative SNP markers that can control for this partition in European population structure in a variety of clinical and genetic studies.

摘要

通过全基因组单核苷酸多态性(SNP)分析,我们在一群多样化的欧洲人和欧裔美国人中观察到了群体结构。在各种条件和测试下,“北欧”和“南欧”人群组之间存在一致且可重复的区别:大多数有南欧血统(意大利、西班牙、葡萄牙和希腊)的个体参与者在“南欧”群体中的成员比例>85%;而大多数北欧、西欧、东欧和中欧人在“北欧”群体中的比例>90%。阿什肯纳兹犹太人和西班牙系犹太人的起源在“南欧”群体中的成员比例也>85%,这与这些族群后来来自地中海地区的起源一致。基于这项工作,我们开发了一组核心的信息丰富的SNP标记,可在各种临床和遗传研究中控制欧洲人群结构中的这种划分。

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Developing CIRdb as a catalog of natural genetic variation in the Canary Islanders.开发 CIRdb,作为加那利群岛人群中自然遗传变异的目录。
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