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蛋白质上O-连接的N-乙酰葡糖胺位点的鉴定

Identification of O-GlcNAc sites on proteins.

作者信息

Whelan Stephen A, Hart Gerald W

机构信息

Department of Biological Chemistry, Johns Hopkins University School of Medicine, Baltimore, MD, USA.

出版信息

Methods Enzymol. 2006;415:113-33. doi: 10.1016/S0076-6879(06)15008-9.

Abstract

O-linked N-acetylglucosamine (O-GlcNAc) is a monosaccharide posttranslational modification that modifies serine/threonine residues of nucleocytoplasmic proteins in metazoans. O-GlcNAc, like phosphorylation, is dynamic and responsive to numerous stimuli in diverse regulatory pathways. O-GlcNAc may also be found adjacent to or at the same sites as phosphorylation, demonstrating the potential for a reciprocal function on some of these proteins. Like most posttranslational modifications, O-GlcNAc is substoichiometric and may be found at multiple sites with other posttranslational modifications present. Additionally, there is no consensus sequence defining the addition of O-GlcNAc to the peptide backbone, further complicating identification and site mapping. This chapter describes several strategies to confirm that proteins are O-GlcNAc modified and provide subsequent determination of O-GlcNAc attachment sites. We have listed the strengths and limitations of each protocol to allow readers to decide which suits their system and availability of resources. These protocols include galactosyltransferase labeling, immunoblotting, using mass spectrometry based on beta-elimination followed by Michael addition with dithiothreitol, and chemoenzymatic labeling, enrichment, and detection.

摘要

O-连接的N-乙酰葡糖胺(O-GlcNAc)是一种单糖翻译后修饰,可修饰后生动物中核质蛋白的丝氨酸/苏氨酸残基。与磷酸化一样,O-GlcNAc具有动态性,并且在多种调节途径中对众多刺激有反应。O-GlcNAc也可能出现在磷酸化位点的相邻位置或相同位点,这表明这些蛋白质中的一些具有相互作用的潜力。与大多数翻译后修饰一样,O-GlcNAc是亚化学计量的,并且可能与其他存在的翻译后修饰一起出现在多个位点。此外,没有确定O-GlcNAc添加到肽主链上的共有序列,这进一步增加了鉴定和位点定位的复杂性。本章描述了几种确认蛋白质被O-GlcNAc修饰并随后确定O-GlcNAc附着位点的策略。我们列出了每个方案的优点和局限性,以便读者决定哪种方案适合他们的系统和资源可用性。这些方案包括半乳糖基转移酶标记、免疫印迹、基于β-消除后用二硫苏糖醇进行迈克尔加成的质谱分析,以及化学酶标记、富集和检测。

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