Jain Rishi, Knorr Andrea L, Bernacki Joseph, Srivastava Ranjan
Department of Chemical, Materials and Biomolecular Engineering, University of Connecticut, Storrs, Connecticut 06269, USA.
Biotechnol Prog. 2006 Nov-Dec;22(6):1650-8. doi: 10.1021/bp060161s.
Lytic phages infect their bacterial hosts, use the host machinery to replicate, and finally lyse and kill their hosts, releasing progeny phages. Various mathematical models have been developed that describe these phage-host viral dynamics. The aim of this study was to determine which of these models best describes the viral dynamics of lytic RNA phage MS2 and its host Escherichia coli C-3000. Experimental data consisted of uninfected and infected bacterial cell densities, free phage density, and substrate concentration. Parameters of various models were either determined directly through other experimental techniques or estimated using regression analysis of the experimental data. The models were evaluated using a Bayesian-based model discrimination technique. Through model discrimination it was shown that phage-resistant cells inhibited the growth of phage population. It was also shown that the uninfected bacterial population was a quasispecies consisting of phage-sensitive and phage-resistant bacterial cells. When there was a phage attack the phage-sensitive cells died out and the phage-resistant cells were selected for and became the dominant strain of the bacterial population.
裂解性噬菌体感染其细菌宿主,利用宿主机制进行复制,最终裂解并杀死宿主,释放出子代噬菌体。已经开发出各种数学模型来描述这些噬菌体-宿主病毒动态。本研究的目的是确定这些模型中哪一个最能描述裂解性RNA噬菌体MS2及其宿主大肠杆菌C-3000的病毒动态。实验数据包括未感染和感染的细菌细胞密度、游离噬菌体密度和底物浓度。各种模型的参数要么通过其他实验技术直接确定,要么使用实验数据的回归分析进行估计。使用基于贝叶斯的模型判别技术对模型进行评估。通过模型判别表明,噬菌体抗性细胞抑制了噬菌体群体的生长。还表明未感染的细菌群体是一个由噬菌体敏感和噬菌体抗性细菌细胞组成的准种。当受到噬菌体攻击时,噬菌体敏感细胞死亡,噬菌体抗性细胞被选择并成为细菌群体的优势菌株。