Tekeli Alper, Erdem Birsel, Sahin Fikret, Koyuncu Esra, Karasartova Djursun, Bayramova Mehseti
Department of Microbiology and Clinical Microbiology, Ankara University School of Medicine, Ankara, Turkey.
New Microbiol. 2006 Oct;29(4):251-60.
The aim of the study was to investigate the characteristics of Salmonella serotype Enteritidis strains isolated from outbreaks and sporadic cases in Turkey by plasmid profiles and randomly amplified polymorphic DNA (RAPD) patterns. A total of 64 S. Enteritidis clinical strains were selected from the culture collection of the Enterobacteria Laboratory of Ankara University Medical School Department of Microbiology and Clinical Microbiology for molecular analysis using the plasmid profiles and RAPD method. Fifty-six isolates (88%) harbored one to four plasmids ranging in size from 2.5 to 100 kbp. 57 kbp plasmids were the most common plasmids, and forty-four strains (69%) carried 57 kbp plasmids alone or together with other plasmids. The outbreak strains carried the same plasmid profile: three plasmids sized 57, 40, 3.0 kbp. None of the strains analyzed displayed any RAPD bands with the primer OPB-17. By using primer p-1254, 42 strains (66%) were divided into fourteen RAPD patterns. Ten of the outbreak strains (77%) showed >80% similarity by cluster analysis program. Analysis of RAPD-PCR with primer p-1254 proved an easy, rapid and discriminative method complementing antibiogram and plasmid profiles in routine laboratories, and may contribute to the investigations of S. Enteritidis which still cause outbreaks in Turkey. This study presents the first report on S. Enteritidis isolates in Turkey investigated by plasmid profiles and RAPD methods.
本研究的目的是通过质粒图谱和随机扩增多态性DNA(RAPD)模式,调查从土耳其的暴发疫情和散发病例中分离出的肠炎沙门氏菌血清型菌株的特征。从安卡拉大学医学院微生物学和临床微生物学系肠杆菌实验室的培养物收集中,共选择了64株肠炎沙门氏菌临床菌株,采用质粒图谱和RAPD方法进行分子分析。56株分离株(88%)携带1至4个质粒,大小从2.5到100 kbp不等。57 kbp质粒是最常见的质粒,44株菌株(69%)单独携带57 kbp质粒或与其他质粒一起携带。暴发菌株具有相同的质粒图谱:三个大小分别为57、40、3.0 kbp的质粒。所分析的菌株中没有一个用引物OPB - 17显示出任何RAPD条带。使用引物p - 1254时,42株菌株(66%)被分为14种RAPD模式。通过聚类分析程序,10株暴发菌株(77%)显示出>80%的相似性。用引物p - 1254进行RAPD - PCR分析证明,这是一种在常规实验室中补充抗菌谱和质粒图谱的简便、快速且具有鉴别力的方法,可能有助于对仍在土耳其引发疫情的肠炎沙门氏菌进行调查。本研究首次报道了用质粒图谱和RAPD方法对土耳其肠炎沙门氏菌分离株进行的调查。