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黑猩猩、红毛猩猩、小鼠和人类的细胞周期启动子不受种间差异影响,其中不包括CCAAT框和CHR元件。

Chimpanzee, orangutan, mouse, and human cell cycle promoters exempt CCAAT boxes and CHR elements from interspecies differences.

作者信息

Müller Gerd A, Heissig Florian, Engeland Kurt

机构信息

Department of Internal Medicine II, Max Bürger Research Center, University of Leipzig, Leipzig, Germany.

出版信息

Mol Biol Evol. 2007 Mar;24(3):814-26. doi: 10.1093/molbev/msl210. Epub 2007 Jan 6.

Abstract

Mechanisms regulating the cell division cycle are well conserved among all eukaryotes. Consistently many proteins regulating the cell cycle are functionally interchangeable between many organisms. Cell division control is regulated on different levels of which the transcriptional level appears to be particularly important for controlling synthesis of many cell cycle proteins. We had earlier described transcription factor-binding sites essential for regulating genes important for the transition from the G(2) phase to mitosis. A tandem repressor site named cell cycle-dependent element (CDE) and cell cycle genes homology region (CHR) are responsible for the correct expression during the cell cycle. Another feature of these G(2)/M-specific promoters is the activation through 2 or 3 CCAAT boxes binding the transcription factor nuclear factor-Y (NF-Y). These major activating sites have to be spaced 32 or 33 bp apart to be fully functional. We were interested in looking at the evolutionary changes in regulatory elements and overall promoter structure of 3 well-characterized cell cycle genes. Here, we compare the DNA sequences and functional features of the cdc25C, cyclin B1, and cyclin B2 promoters from humans, mouse, chimpanzee, and orangutan. We find numerous differences in the nucleotide sequence between mouse and primate promoters. However, CHR and CCAAT boxes stand out in that they are perfectly conserved in all promoters tested. The CDE site contains nucleotide exchanges between mouse and primate promoters. Comparing sequences and functions of chimpanzee, orangutan, and human promoters, we observe a complete conservation in nucleotide sequence of the regulatory elements. Functional assays of the cyclin B1, cyclin B2, and cdc25C promoters yield moderate variations in activity and thereby a good conservation of function. Although we find nucleotide differences in cell cycle promoters between orangutan and humans of about 5%, there are never changes in any of the CCAAT boxes or CDE/CHR sites in the cyclin B1, cyclin B2, and cdc25C promoters. Furthermore, we describe the influence of the tumor suppressor p53 and the transcriptional activator NF-Y on regulation of the newly cloned primate promoters.

摘要

调控细胞分裂周期的机制在所有真核生物中都得到了很好的保守。相应地,许多调控细胞周期的蛋白质在许多生物体之间在功能上是可互换的。细胞分裂控制在不同水平上受到调控,其中转录水平对于控制许多细胞周期蛋白的合成似乎尤为重要。我们之前已经描述了对于调控从G2期到有丝分裂重要的基因所必需的转录因子结合位点。一个名为细胞周期依赖性元件(CDE)和细胞周期基因同源区域(CHR)的串联抑制位点负责细胞周期中的正确表达。这些G2/M特异性启动子的另一个特征是通过结合转录因子核因子-Y(NF-Y)的2个或3个CCAAT框进行激活。这些主要的激活位点必须相隔32或33个碱基对才能完全发挥功能。我们有兴趣研究3个特征明确的细胞周期基因的调控元件和整体启动子结构的进化变化。在这里,我们比较了人类、小鼠、黑猩猩和猩猩的cdc25C、细胞周期蛋白B1和细胞周期蛋白B2启动子的DNA序列和功能特征。我们发现小鼠和灵长类启动子之间的核苷酸序列存在许多差异。然而,CHR和CCAAT框很突出,因为它们在所有测试的启动子中都完全保守。CDE位点在小鼠和灵长类启动子之间存在核苷酸交换。比较黑猩猩、猩猩和人类启动子的序列和功能,我们观察到调控元件的核苷酸序列完全保守。细胞周期蛋白B1、细胞周期蛋白B2和cdc25C启动子的功能测定产生了适度的活性变化,从而功能得到了很好的保守。尽管我们发现猩猩和人类之间的细胞周期启动子中的核苷酸差异约为5%,但细胞周期蛋白B1、细胞周期蛋白B2和cdc25C启动子中的任何CCAAT框或CDE/CHR位点都从未发生变化。此外,我们描述了肿瘤抑制因子p53和转录激活因子NF-Y对新克隆的灵长类启动子调控的影响。

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