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去饱和酶反应使降蒈烷作为一种机理探针的应用变得复杂。解析在降蒈烷的酶催化氧化反应中形成的二十多种产物的混合物。

Desaturase reactions complicate the use of norcarane as a mechanistic probe. Unraveling the mixture of twenty-plus products formed in enzyme-catalyzed oxidations of norcarane.

作者信息

Newcomb Martin, Chandrasena R Esala P, Lansakara-P Dharmika S P, Kim Hye-Yeong, Lippard Stephen J, Beauvais Laurance G, Murray Leslie J, Izzo Viviana, Hollenberg Paul F, Coon Minor J

机构信息

Department of Chemistry, University of Illinois at Chicago, 845 West Taylor Street, Chicago, IL 60607, USA.

出版信息

J Org Chem. 2007 Feb 16;72(4):1121-7. doi: 10.1021/jo061864r.

Abstract

Norcarane, bicyclo[4.1.0]heptane, has been widely used as a mechanistic probe in studies of oxidations catalyzed by several iron-containing enzymes. We report here that, in addition to oxygenated products, norcarane is also oxidized by iron-containing enzymes in desaturase reactions that give 2-norcarene and 3-norcarene. Furthermore, secondary products from further oxidation reactions of the norcarenes are produced in yields that are comparable to those of the minor products from oxidation of the norcarane. We studied oxidations catalyzed by a representative spectrum of iron-containing enzymes including four cytochrome P450 enzymes, CYP2B1, CYPDelta2B4, CYPDelta2E1, and CYPDelta2E1 T303A, and three diiron enzymes, soluble methane monooxygenase (sMMO) from Methylococcus capsulatus (Bath), toluene monooxygenase (ToMO) from Pseudomonas stutzeri OX1, and phenol hydroxylase (PH) from Pseudomonas stutzeri OX1. 2-Norcarene and 3-norcarene and their oxidation products were found in all reaction mixtures, accounting for up to half of the oxidation products in some cases. In total, more than 20 oxidation products were identified from the enzyme-catalyzed reactions of norcarane. The putative radical-derived product from the oxidation of norcarane, 3-hydroxymethylcyclohexene (21), and the putative cation-derived product from the oxidation of norcarane, cyclohept-3-enol (22), coelute with other oxidation products on low-polarity GC columns. The yields of product 21 found in this study are smaller than those previously reported for the same or similar enzymes in studies where the products from norcarene oxidations were ignored, and therefore, the limiting values for lifetimes of radical intermediates produced in the enzyme-catalyzed oxidation reactions are shorter than those previously reported.

摘要

降蒈烷,即双环[4.1.0]庚烷,在多种含铁酶催化的氧化反应研究中被广泛用作机理探针。我们在此报告,除了氧化产物外,降蒈烷在去饱和酶反应中还会被含铁酶氧化,生成2-降蒈烯和3-降蒈烯。此外,降蒈烯进一步氧化反应的次级产物的产率与降蒈烷氧化的次要产物相当。我们研究了一系列具有代表性的含铁酶催化的氧化反应,包括四种细胞色素P450酶,即CYP2B1、CYPDelta2B4、CYPDelta2E1和CYPDelta2E1 T303A,以及三种双铁酶,来自荚膜甲基球菌(巴斯)的可溶性甲烷单加氧酶(sMMO)、来自施氏假单胞菌OX1的甲苯单加氧酶(ToMO)和来自施氏假单胞菌OX1的苯酚羟化酶(PH)。在所有反应混合物中均发现了2-降蒈烯和3-降蒈烯及其氧化产物,在某些情况下,它们占氧化产物的一半。总共从降蒈烷的酶催化反应中鉴定出了20多种氧化产物。降蒈烷氧化产生的假定自由基衍生产物3-羟甲基环己烯(21)和降蒈烷氧化产生的假定阳离子衍生产物环庚-3-烯醇(22),在低极性气相色谱柱上与其他氧化产物共洗脱。本研究中发现的产物21的产率低于之前在忽略降蒈烯氧化产物的研究中对相同或相似酶报道的产率,因此,酶催化氧化反应中产生的自由基中间体的寿命极限值比之前报道的要短。

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