Suppr超能文献

膜结合蛋白中的亚基计数

Subunit counting in membrane-bound proteins.

作者信息

Ulbrich Maximilian H, Isacoff Ehud Y

机构信息

Department of Molecular and Cell Biology, University of California, Berkeley Material Science & Physical Bioscience Divisions, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA.

出版信息

Nat Methods. 2007 Apr;4(4):319-21. doi: 10.1038/nmeth1024. Epub 2007 Mar 18.

Abstract

The subunit number and stoichiometry of membrane-bound proteins are difficult to determine without disrupting their membrane environment. Here we describe a single-molecule technique for counting subunits of proteins in live cell membranes by observing bleaching steps of GFP fused to a protein of interest. After testing the method with proteins of known stoichiometry expressed in Xenopus laevis oocytes, we resolved the composition of NMDA receptors composed of NR1 and NR3 subunits.

摘要

在不破坏膜环境的情况下,很难确定膜结合蛋白的亚基数量和化学计量比。在此,我们描述了一种单分子技术,通过观察与感兴趣的蛋白质融合的绿色荧光蛋白(GFP)的漂白步骤来计数活细胞膜中蛋白质的亚基。在用非洲爪蟾卵母细胞中表达的已知化学计量比的蛋白质测试该方法后,我们解析了由NR1和NR3亚基组成的N-甲基-D-天冬氨酸受体(NMDA受体)的组成。

相似文献

1
Subunit counting in membrane-bound proteins.
Nat Methods. 2007 Apr;4(4):319-21. doi: 10.1038/nmeth1024. Epub 2007 Mar 18.
2
Principal role of NR3 subunits in NR1/NR3 excitatory glycine receptor function.
Biochem Biophys Res Commun. 2007 Mar 2;354(1):102-8. doi: 10.1016/j.bbrc.2006.12.153. Epub 2006 Dec 28.
3
Formation of NR1/NR2 and NR1/NR3 heterodimers constitutes the initial step in N-methyl-D-aspartate receptor assembly.
J Biol Chem. 2008 Jan 4;283(1):37-46. doi: 10.1074/jbc.M703539200. Epub 2007 Oct 24.
4
Apparent homomeric NR1 currents observed in Xenopus oocytes are caused by an endogenous NR2 subunit.
J Mol Biol. 2008 Feb 22;376(3):658-70. doi: 10.1016/j.jmb.2007.11.105. Epub 2007 Dec 8.
6
Rules of engagement for NMDA receptor subunits.
Proc Natl Acad Sci U S A. 2008 Sep 16;105(37):14163-8. doi: 10.1073/pnas.0802075105. Epub 2008 Sep 8.
7
Subunit assembly of N-methyl-d-aspartate receptors analyzed by fluorescence resonance energy transfer.
J Biol Chem. 2005 Jul 1;280(26):24923-30. doi: 10.1074/jbc.M413915200. Epub 2005 May 10.
10
Excitatory glycine receptors containing the NR3 family of NMDA receptor subunits.
Nature. 2002 Feb 14;415(6873):793-8. doi: 10.1038/nature715. Epub 2002 Jan 30.

引用本文的文献

1
ACE2 Receptor and Antibody Binding to SARS-CoV‑2 Spikes and Virions by Single-Molecule Fluorescence.
ACS Omega. 2025 Jul 31;10(31):34844-34856. doi: 10.1021/acsomega.5c03887. eCollection 2025 Aug 12.
4
A Bayesian Model to Count the Number of Two-State Emitters in a Diffraction Limited Spot.
Nano Lett. 2025 Apr 16;25(15):6059-6068. doi: 10.1021/acs.nanolett.4c06304. Epub 2025 Apr 4.
5
Cholesterol inhibits assembly and oncogenic activation of the EphA2 receptor.
Commun Biol. 2025 Mar 11;8(1):411. doi: 10.1038/s42003-025-07786-6.
6
Bayesian Inference of Binding Kinetics from Fluorescence Time Series.
bioRxiv. 2025 Feb 3:2025.02.03.636267. doi: 10.1101/2025.02.03.636267.
7
A signaling molecule from intratumor bacteria promotes trastuzumab resistance in breast cancer cells.
Proc Natl Acad Sci U S A. 2025 Jan 14;122(2):e2421710122. doi: 10.1073/pnas.2421710122. Epub 2025 Jan 9.
8
Biased movement of monomeric kinesin-3 KLP-6 explained by a symmetric Brownian ratchet model.
Biophys J. 2025 Jan 7;124(1):205-214. doi: 10.1016/j.bpj.2024.11.3312. Epub 2024 Nov 26.
9
A roadmap to cysteine specific labeling of membrane proteins for single-molecule photobleaching studies.
Methods. 2025 Feb;234:21-35. doi: 10.1016/j.ymeth.2024.10.013. Epub 2024 Nov 23.
10
The MRAP2 accessory protein directly interacts with melanocortin-3 receptor to enhance signaling.
bioRxiv. 2024 Nov 6:2024.11.06.622243. doi: 10.1101/2024.11.06.622243.

本文引用的文献

1
Stoichiometry and turnover in single, functioning membrane protein complexes.
Nature. 2006 Sep 21;443(7109):355-8. doi: 10.1038/nature05135. Epub 2006 Sep 13.
2
Subunit arrangement and function in NMDA receptors.
Nature. 2005 Nov 10;438(7065):185-92. doi: 10.1038/nature04089.
3
Distinct structural determinants of efficacy and sensitivity in the ligand-binding domain of cyclic nucleotide-gated channels.
J Biol Chem. 2004 Jan 30;279(5):3553-62. doi: 10.1074/jbc.M310545200. Epub 2003 Oct 31.
4
A quantitative description of membrane current and its application to conduction and excitation in nerve.
J Physiol. 1952 Aug;117(4):500-44. doi: 10.1113/jphysiol.1952.sp004764.
6
The heteromeric cyclic nucleotide-gated channel adopts a 3A:1B stoichiometry.
Nature. 2002 Nov 14;420(6912):193-8. doi: 10.1038/nature01201.
7
Structural rearrangements in single ion channels detected optically in living cells.
Proc Natl Acad Sci U S A. 2002 Oct 1;99(20):12759-64. doi: 10.1073/pnas.192261499. Epub 2002 Sep 12.
8
Excitatory glycine receptors containing the NR3 family of NMDA receptor subunits.
Nature. 2002 Feb 14;415(6873):793-8. doi: 10.1038/nature715. Epub 2002 Jan 30.
9
The nature of fluorescence emission in the red fluorescent protein DsRed, revealed by single-molecule detection.
Proc Natl Acad Sci U S A. 2001 Dec 4;98(25):14392-7. doi: 10.1073/pnas.251525598. Epub 2001 Nov 27.
10
Constraining the subunit order of rod cyclic nucleotide-gated channels reveals a diagonal arrangement of like subunits.
Proc Natl Acad Sci U S A. 2000 Jan 18;97(2):895-900. doi: 10.1073/pnas.97.2.895.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验