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通过振动圆二色性、电子圆二色性和旋光性的密度泛函理论计算确定天然产物的绝对构型:环烯醚萜类化合物车叶草苷和异车叶草苷

Determination of the absolute configurations of natural products via density functional theory calculations of vibrational circular dichroism, electronic circular dichroism, and optical rotation: the iridoids plumericin and isoplumericin.

作者信息

Stephens P J, Pan J J, Devlin F J, Krohn K, Kurtán T

机构信息

Department of Chemistry, University of Southern California, Los Angeles, California 90089-0482, USA.

出版信息

J Org Chem. 2007 Apr 27;72(9):3521-36. doi: 10.1021/jo070155q. Epub 2007 Mar 28.

Abstract

The absolute configurations (ACs) of the iridoid natural products, plumericin (1) and isoplumericin (2), have been re-investigated using vibrational circular dichroism (VCD) spectroscopy, electronic circular dichroism (ECD) spectroscopy, and optical rotatory dispersion (ORD). Comparison of DFT calculations of the VCD spectra of 1 and 2 to the experimental VCD spectra of the natural products, (+)-1 and (+)-2, leads unambiguously to the AC (1R,5S,8S,9S,10S)-(+) for both 1 and 2. In contrast, comparison of time-dependent DFT (TDDFT) calculations of the ECD spectra of 1 and 2 to the experimental spectra of (+)-1 and (+)-2 does not permit definitive assignment of their ACs. On the other hand, TDDFT calculations of the ORD of (1R,5S,8S,9S,10S)-1 and -2 over the range of 365-589 nm are in excellent agreement with the experimental data of (+)-1 and (+)-2, confirming the ACs derived from the VCD spectra. Thus, the ACs initially proposed by Albers-Schönberg and Schmid are shown to be correct, and the opposite ACs recently derived from the ECD spectra of 1 and 2 by Elsässer et al. are shown to be incorrect. As a result, the ACs of other iridoid natural products obtained by chemical correlation with 1 and 2 are not in need of revision.

摘要

已使用振动圆二色光谱(VCD)、电子圆二色光谱(ECD)和旋光色散(ORD)对环烯醚萜类天然产物plumericin(1)和异plumericin(2)的绝对构型(ACs)进行了重新研究。将1和2的VCD光谱的DFT计算结果与天然产物(+)-1和(+)-2的实验VCD光谱进行比较,明确得出1和2的AC均为(1R,5S,8S,9S,10S)-(+)。相比之下,将1和2的ECD光谱的含时密度泛函理论(TDDFT)计算结果与(+)-1和(+)-2的实验光谱进行比较,无法明确确定它们的ACs。另一方面,(1R,5S,8S,9S,10S)-1和-2在365 - 589 nm范围内的ORD的TDDFT计算结果与(+)-1和(+)-2的实验数据高度吻合,证实了从VCD光谱得出的ACs。因此,阿尔伯斯 - 舍恩贝格和施密德最初提出的ACs被证明是正确的,而埃尔萨瑟等人最近从1和2的ECD光谱得出的相反ACs被证明是错误的。结果,通过与1和2进行化学关联得到的其他环烯醚萜类天然产物的ACs无需修订。

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