Narasimhulu Kuppala V, Carmieli Raanan, Goldfarb Daniella
Department of Chemical Physics, The Weizmann Institute of Science, Rehovot, Israel.
J Am Chem Soc. 2007 May 2;129(17):5391-402. doi: 10.1021/ja0662826. Epub 2007 Apr 5.
Concanavalin A is a member of the plant hemeagglutinin (or plant lectin) family that contains two metal binding sites; one, called S1, is occupied by Mn2+ and the other, S2, by Ca2+. 55Mn electron-nuclear double resonance (ENDOR) measurements were performed on a single crystal of concanavalin A at W-band (95 GHz, ~3.5 T) to determine the 55Mn nuclear quadrupole interaction in a protein binding site and its relation to structural parameters. Such measurements are easier at a high field because of the high sensitivity for size-limited samples and the reduction of second-order effects on the spectrum which simplifies spectral analysis. The analysis of the 55Mn ENDOR rotation patterns showed that two chemically inequivalent Mn2+ types are present at low temperatures, although the high-resolution X-ray structure reported only one site. Their quadrupole coupling constants, e2Qq/h, are significantly different; 10.7 +/- 0.6 MHz for Mand only -2.7 +/-0.6 MHz for M. The ENDOR data also refined the hyperfine coupling determined earlier by single-crystal EPR measurements, yielding a small but significant difference between the two: -262.5 MHz for M and -263.5 MHz for M. The principal z-axis for M is not aligned with any of the Mn-ligand directions, but is 25 off the Mn-asp10 direction, and its orientation is different than that of the zero-field splitting (ZFS) interaction. Because of the small quadrupole interaction of M the orientation dependence was very mild, leading to larger uncertainties in the asymmetry parameter. Nonetheless, there too z is not along the Mn-ligand bonds and is rotated 90 with respect to MnA. These results show, that similar to the ZFS, the quadrupolar interaction is highly sensitive to small differences in the coordination sphere of the Mn2+, and the resolution of the two types is in agreement with the earlier observation of a two-site conformational dynamic detected through the ZFS interaction, which is frozen out at low temperatures and averaged at room temperature. To account for the structural origin of the different e2Qq/h values, the electric field gradient tensor was calculated using the point-charge model. The calculations showed that a relatively small displacement of the oxygen ligand of asp10 can lead to differences on the order observed experimentally.
伴刀豆球蛋白A是植物血凝素(或植物凝集素)家族的一员,含有两个金属结合位点;一个称为S1,被Mn2+占据,另一个S2被Ca2+占据。在W波段(95 GHz,约3.5 T)对伴刀豆球蛋白A的单晶进行了55Mn电子-核双共振(ENDOR)测量,以确定蛋白质结合位点中的55Mn核四极相互作用及其与结构参数的关系。由于对尺寸受限样品的高灵敏度以及光谱二阶效应的降低,使得光谱分析更加简化,因此在高场下进行此类测量更容易。对55Mn ENDOR旋转模式的分析表明,在低温下存在两种化学不等价的Mn2+类型,尽管高分辨率X射线结构仅报道了一个位点。它们的四极耦合常数e2Qq/h有显著差异;M1的为10.7±0.6 MHz,而M2的仅为-2.7±0.6 MHz。ENDOR数据还完善了早期通过单晶EPR测量确定的超精细耦合,结果表明两者之间存在微小但显著的差异:M1为-262.5 MHz,M2为-263.5 MHz。M1的主z轴与任何Mn-配体方向都不平行,与Mn-asp10方向偏离25°,其取向与零场分裂(ZFS)相互作用的取向不同。由于M2的四极相互作用较小,取向依赖性非常微弱,导致不对称参数的不确定性更大。尽管如此,在那里z也不沿着Mn-配体键,并且相对于MnA旋转了90°。这些结果表明,与ZFS类似,四极相互作用对Mn2+配位球中的微小差异高度敏感,两种类型的分辨与早期通过ZFS相互作用检测到的双位点构象动力学观察结果一致,该动力学在低温下冻结,在室温下平均化。为了解释不同e2Qq/h值的结构起源,使用点电荷模型计算了电场梯度张量。计算结果表明,asp10的氧配体相对较小的位移会导致实验观察到的量级差异。