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集水区包罗万象:澳大利亚东南部高地一种巨型跳虫的长期种群历史——一种多基因方法。

Catchments catch all: long-term population history of a giant springtail from the southeast Australian highlands--a multigene approach.

作者信息

Garrick R C, Sands C J, Rowell D M, Hillis D M, Sunnucks P

机构信息

Department of Genetics, La Trobe University, Bundoora, Vic. 3086, Australia.

出版信息

Mol Ecol. 2007 May;16(9):1865-82. doi: 10.1111/j.1365-294X.2006.03165.x.

DOI:10.1111/j.1365-294X.2006.03165.x
PMID:17444898
Abstract

Phylogeography can reveal evolutionary processes driving natural genetic-geographical patterns in biota, providing an empirical framework for optimizing conservation strategies. The long-term population history of a rotting-log-adapted giant springtail (Collembola) from montane southeast Australia was inferred via joint analysis of mitochondrial and multiple nuclear gene genealogies. Contemporary populations were identified using multilocus nuclear genotype clustering. Very fine-scale sampling combined with nested clade and coalescent-based analyses of sequences from mitochondrial cytochrome oxidase I and three unlinked nuclear loci uncovered marked population structure, deep molecular divergences, and abrupt phylogeographical breaks over distances on the order of tens of kilometres or less. Despite adaptations that confer low mobility, rare long-distance gene flow was implicated: novel computer simulations that jointly modelled stochasticity inherent in coalescent processes and that of DNA sequence evolution showed that incomplete lineage sorting alone was unable to explain the observed spatial-genetic patterns. Impacts of Pleistocene or earlier climatic cycles were detected on multiple timescales, and at least three putative moist forest refuges were identified. Water catchment divisions predict phylogeographical patterning and present-day population structure with high precision, and may serve as an excellent surrogate for biodiversity indication in sedentary arthropods from topographically heterogeneous montane temperate forests.

摘要

系统发育地理学可以揭示驱动生物群自然遗传地理模式的进化过程,为优化保护策略提供一个实证框架。通过对线粒体和多个核基因谱系的联合分析,推断出澳大利亚东南部山区一种适应腐烂原木的巨型弹尾虫(弹尾目)的长期种群历史。利用多位点核基因型聚类来识别当代种群。非常精细的采样,结合对线粒体细胞色素氧化酶I和三个不连锁核基因座序列的嵌套分支和基于溯祖的分析,揭示了显著的种群结构、深度分子分歧,以及在几十公里或更短距离内的突然系统发育地理间断。尽管具有低迁移率的适应性特征,但仍存在罕见的长距离基因流:新的计算机模拟联合模拟了溯祖过程中固有的随机性和DNA序列进化的随机性,结果表明仅不完全谱系分选无法解释观察到的空间遗传模式。在多个时间尺度上检测到更新世或更早气候周期的影响,并确定了至少三个假定的湿润森林避难所。集水区划分能够高精度地预测系统发育地理格局和当今的种群结构,并且可以作为地形异质的山地温带森林中定居节肢动物生物多样性指示的优秀替代指标。

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