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[2'-脱氧胞苷构象中的分子内氢键:电子密度拓扑结构的量子化学分析结果]

[Intramolecular hygrogen bonds in conformers of 2'-deoxycytidine: results of quantum-chemical analysis of electron density topology].

作者信息

Zhurakivs'kyĭ R O, Hovorun D M

出版信息

Ukr Biokhim Zh (1999). 2006 Nov-Dec;78(6):70-7.

Abstract

As many as 13 types of intramolecular hygrogen bonds are determined in 89 conformers of 2'-deoxycytidine nucleoside by means of quantum-chemical analysis (at DFT B3LYP/6-31G(d,p) theory level) of electron density topology with Atoms-in-Molecules (AIM) theory. The total number of H-bonds is 168 and their types are C1'H...O2, C2'H2...O5', C2'H2...O2, C3'H...O2, C5'H1...O2, C5'H2...O2, C6H...O4', C6H...O5', C3'H...HC6, O3'H...O5', O5'H...O3', O5'H...O4' and O5'H...O2. Conformational, geometric and electron-topological properties of H-bonds are presented.

摘要

借助量子化学分析(在密度泛函理论B3LYP/6 - 31G(d,p)理论水平下)以及分子中的原子(AIM)理论对电子密度拓扑结构进行分析,在2'-脱氧胞苷核苷的89种构象中确定了多达13种分子内氢键。氢键总数为168个,其类型有C1'H...O2、C2'H2...O5'、C2'H2...O2、C3'H...O2、C5'H1...O2、C5'H2...O2、C6H...O4'、C6H...O5'、C3'H...HC6、O3'H...O5'、O5'H...O3'、O5'H...O4'和O5'H...O2。文中给出了氢键的构象、几何和电子拓扑性质。

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