Watanabe Masakatsu, Hiraide Kazue, Okada Norihiro
Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology, Japan.
Gene. 2007 Sep 1;399(1):46-52. doi: 10.1016/j.gene.2007.04.024. Epub 2007 May 1.
Mutation in the inward rectifier potassium channel gene, kir7.1, was previously identified as being responsible for the broader stripe zebrafish skin pattern mutant, jaguar/obelix. An amino acid substitution in this channel causes a broader stripe pattern than that of wild type zebrafish. In this study we analyzed cichlid homologs of the zebrafish kir7.1 gene. We identified two kinds of homologous genes in cichlids and named them cikir7.1 and cikir7.2. Southern hybridization using cichlid genome revealed that cichlids from the African Great Lakes, South America and Madagascar have two copies of the gene. Cichlids from Sri Lanka, however, showed only one band in this experiment. Database analysis revealed that only one copy of the kir7.1 gene exists in the genomes of the teleosts zebrafish, tetraodon, takifugu, medaka and stickleback. The deduced amino acid sequence of cikir7.1 is highly conserved among African cichlids, whereas that of cikir7.2 has several amino acid substitutions even in conserved transmembrane domains. Gene expression analysis revealed that cikir7.1 is expressed specifically in brain and eye, and cikir7.2 in testis and ovary; zebrafish kir7.1, however, is expressed in brain, eye, skin, caudal fin, testis and ovary. These results suggest that gene duplication of the cichlid kir7.1 occurred in a common ancestor of the family Cichlidae, that the function of parental kir7.1 was then divided into two genes, cikir7.1 and cikir7.2, and that the evolutionary rate of cikir7.2 might have been accelerated, thereby effecting functional diversification in the cichlid lineage. Thus, the evolution of kir7.1 genes in cichlids provides a typical example of gene duplication--one gene is conserved while the other becomes specialized for a novel function.
内向整流钾通道基因kir7.1的突变先前被确定为导致斑马鱼皮肤斑纹更宽的突变体jaguar/obelix的原因。该通道中的一个氨基酸替换导致了比野生型斑马鱼更宽的条纹图案。在本研究中,我们分析了斑马鱼kir7.1基因的丽鱼科同源物。我们在丽鱼科鱼类中鉴定出两种同源基因,并将它们命名为cikir7.1和cikir7.2。使用丽鱼科基因组进行的Southern杂交显示,来自非洲大湖、南美洲和马达加斯加的丽鱼科鱼类有该基因的两个拷贝。然而,在这个实验中,来自斯里兰卡的丽鱼科鱼类只显示出一条带。数据库分析显示,硬骨鱼斑马鱼、河豚、红鳍东方鲀、青鳉和棘鱼的基因组中仅存在一份kir7.1基因拷贝。cikir7.1推导的氨基酸序列在非洲丽鱼科鱼类中高度保守,而cikir7.2的氨基酸序列即使在保守的跨膜结构域中也有几个氨基酸替换。基因表达分析显示,cikir7.1在脑和眼中特异性表达,而cikir7.2在睾丸和卵巢中表达;然而,斑马鱼kir7.1在脑、眼、皮肤、尾鳍、睾丸和卵巢中表达。这些结果表明,丽鱼科kir7.1的基因复制发生在丽鱼科的一个共同祖先中,亲本kir7.1的功能随后被分为两个基因,cikir7.1和cikir7.2,并且cikir7.2的进化速率可能已经加快,从而导致丽鱼科谱系中的功能多样化。因此,丽鱼科鱼类中kir7.1基因的进化提供了一个基因复制的典型例子——一个基因被保留,而另一个则专门用于新功能。