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白细胞端粒长度与两个衰老相关候选基因中的遗传变异之间缺乏关联。

Lack of association between leukocyte telomere length and genetic variants in two ageing-related candidate genes.

作者信息

Zhang Feng, Kato Bernet S, Gardner Jeffery P, Kimura Masayuki, Spector Tim D, Ahmadi Kourosh R

机构信息

Twin Research and Genetic Epidemiology Unit, St. Thomas' Hospital, King's College London, United Kingdom.

出版信息

Mech Ageing Dev. 2007 Jul-Aug;128(7-8):415-22. doi: 10.1016/j.mad.2007.05.007. Epub 2007 May 25.

Abstract

BACKGROUND

Leukocyte telomere length, a putative marker of ageing, is a highly variable and heritable complex trait. In order to determine the possible underlying genetic variants for leukocyte telomere length variation, we conducted an association study of leukocyte telomere length and two candidate genes for ageing-related traits, TGFB1 and KLOTHO, in a female Caucasian dizygotic twin population.

METHODS AND MATERIALS

Terminal restriction fragment (TRF) length, an index of telomere length, was measured using Southern Blotting. Six and four single nucleotide polymorphisms (SNP) were genotyped in TGFB1 and KLOTHO gene, respectively, and tested for association. When there is strong LD between SNPs (r(2) > 0.5), haplotypic association was investigated using haplotype trend regression approach.

RESULTS

All SNPs were in Hardy-Weinberg equilibrium (p > 0.05). No significant association was detected for individual SNPs (p > 0.101), or two-locus haplotypes (p = 0.7497) with TRF variation.

CONCLUSION

We failed to find any significant association between leukocyte telomere length and 10 SNPs in two ageing-related candidate genes, TGFB1 and KLOTHO. This result suggests that while we could not exclude minor effects, none of 10 SNPs in these two candidate genes showed significant association with the variation of leukocyte telomere length in our cohort. But as it is unclear whether telomere length dynamics is the cause or the effect of the ageing process, it is still possible the genes are associated with ageing via alternate mechanisms.

摘要

背景

白细胞端粒长度是一种假定的衰老标志物,是一种高度可变且可遗传的复杂性状。为了确定白细胞端粒长度变异可能的潜在遗传变异,我们在一组女性白种人异卵双生子群体中,对白细 胞端粒长度与两个与衰老相关性状的候选基因TGFB1和KLOTHO进行了关联研究。

方法和材料

使用Southern印迹法测量端粒长度指标——末端限制片段(TRF)长度。分别在TGFB1和KLOTHO基因中对6个和4个单核苷酸多态性(SNP)进行基因分型,并测试其关联性。当SNP之间存在强连锁不平衡(r²>0.5)时,使用单倍型趋势回归方法研究单倍型关联性。

结果

所有SNP均处于Hardy-Weinberg平衡(p>0.05)。未检测到单个SNP(p>0.101)或两位点单倍型(p = 0.7497)与TRF变异有显著关联。

结论

我们未能在两个与衰老相关的候选基因TGFB1和KLOTHO中的10个SNP与白细胞端粒长度之间发现任何显著关联。这一结果表明,虽然我们不能排除微小效应,但在我们的队列中,这两个候选基因中的10个SNP均未显示与白细胞端粒长度变异有显著关联。但由于尚不清楚端粒长度动态变化是衰老过程的原因还是结果,这些基因仍有可能通过其他机制与衰老相关联。

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