Suppr超能文献

通过特异性等位基因双向PCR扩增(BI-PASA)检测威尔逊病中的His1069Gln突变。

Detection of His1069Gln mutation in Wilson disease by bidirectional PCR amplification of specific alleles (BI-PASA) test.

作者信息

Poláková H, Katrincsáková B, Minárik G, Feráková E, Ficek A, Baldovic M, Kádasi L

机构信息

Institute of Molecular Physiology and Genetics, Slovak Academy of Sciences, Vlárska 5, 833 34 Bratislava 37, Slovakia.

出版信息

Gen Physiol Biophys. 2007 Jun;26(2):91-6.

Abstract

Wilson disease (WD) is an autosomal recessive disorder of hepatic copper metabolism caused by mutations in a gene encoding a copper-transporting P-type ATPase, ATP7B. The majority of known mutations affecting this gene are frequent in different populations, which may help to introduce rapid diagnostic procedures based on direct DNA analysis into routine clinical practise. The His1069Gln mutation in exon 14 is the most frequent one, accounting for 30-60% of all mutations in Caucasian patients. The aim of the present work was to introduce DNA-based direct analysis into routine molecular screening for the above mutation in Slovak WD patients and to assess its frequency in patients as well as in a control population. Twenty seven clinicaly diagnosed patients from twenty five families, twenty relatives of index patients and three hundred and six control DNA samples were tested using two different DNA-based methods: the earlier described amplification created restriction site (ACRS) for Alw21I in combination with nested PCR and the amplification refractory mutation system (ARMS). In 18 of 25 unrelated patients (72%), the mentioned genetic defect was present in at least one copy. In ten of them (40%), the above mutation was detected in homozygous and in eight individuals (32%) in heterozygous state. In seven WD patients (28%), this mutation was not detected. The allele frequency of His1069Gln in Slovak patients with WD was 56%, which was higher as reported in other populations. In a control group of 306 random DNA samples (612 alleles), the His1069Gln mutation was observed in 3 samples (carrier frequency 1%; allele frequency 0.49%). These frequencies correspond to figures observed in different population of European origin. Taken together, we have provided further evidence that the His1069Gln mutation is the prevalent ATP7B mutation in central-european WD patients. Although both methods used in this study worked in our hands reliably, there are in every-day use some drawbacks and limitations inherent to them (PCR reactions in two tubes, possibility of star activity or not complet digestion by restriction endonuclease, etc.). Therefore we developed a simpler, cost effective and rapid DNA diagnostic test based on bidirectional amplification of specific alleles (BI-PASA), which enables detection of homozygotes (wild and mutant) and heterozygotes, respectivelly, in one PCR reaction. The test was highly sensitive and specific, yielding no false-positive or false-negative results. Its reliability and discriminating power was tested on samples of 27 WD patients and 120 random control DNA's, previously genotyped by above mentioned methods. Comparing results of BI-PASA with ACRS and ARMS tests showed 100% concordance.

摘要

威尔逊病(WD)是一种常染色体隐性遗传性肝脏铜代谢紊乱疾病,由编码铜转运P型ATP酶ATP7B的基因突变引起。影响该基因的大多数已知突变在不同人群中较为常见,这可能有助于将基于直接DNA分析的快速诊断程序引入常规临床实践。外显子14中的His1069Gln突变最为常见,在白种人患者的所有突变中占30 - 60%。本研究的目的是将基于DNA的直接分析引入斯洛伐克WD患者上述突变的常规分子筛查,并评估其在患者及对照人群中的频率。使用两种不同的基于DNA的方法对来自25个家庭的27例临床诊断患者、20例先证者亲属以及306份对照DNA样本进行检测:较早描述的用于Alw21I的扩增产生限制性位点(ACRS)结合巢式PCR以及扩增不应性突变系统(ARMS)。在25例无亲缘关系的患者中有18例(72%)至少有一个拷贝存在上述基因缺陷。其中10例(40%)检测到上述突变呈纯合状态,8例(32%)呈杂合状态。7例WD患者(28%)未检测到该突变。斯洛伐克WD患者中His1069Gln的等位基因频率为56%,高于其他人群的报道。在306份随机DNA样本(612个等位基因)的对照组中,在3份样本中观察到His1069Gln突变(携带频率1%;等位基因频率0.49%)。这些频率与欧洲不同人群中观察到的数值相符。综上所述,我们进一步证明了His1069Gln突变是中欧WD患者中普遍存在的ATP7B突变。尽管本研究中使用的两种方法在我们手中都可靠地发挥作用,但它们在日常使用中存在一些固有的缺点和局限性(在两个管中进行PCR反应、星号活性的可能性或限制性内切酶不完全消化等)。因此,我们开发了一种基于特定等位基因双向扩增(BI - PASA)的更简单、经济高效且快速的DNA诊断测试,该测试能够在一次PCR反应中分别检测纯合子(野生型和突变型)和杂合子。该测试具有高度敏感性和特异性,未产生假阳性或假阴性结果。在先前通过上述方法进行基因分型的27例WD患者和120份随机对照DNA样本上测试了其可靠性和鉴别能力。将BI - PASA的结果与ACRS和ARMS测试结果进行比较,显示一致性为100%。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验