Franzén Ina, Vasaitis Rimvydas, Penttilä Reijo, Stenlid Jan
Department of Forest Mycology and Pathology, Swedish University of Agricultural Sciences, PO Box 7026, SE-75007 Uppsala, Sweden.
Mol Ecol. 2007 Aug;16(16):3326-33. doi: 10.1111/j.1365-294X.2007.03394.x.
The basidiomycete Phlebia centrifuga is a wood-decay fungus characteristic for unmanaged old-growth forests of spruce, a habitat that has become increasingly fragmented due to forest management. The aim of this study was to investigate the genetic population structures of P. centrifuga in both continuous and fragmented habitats, and estimate the potential impact of fragmentation on the genetic diversity of the fungus. Three hundred fifteen single spore isolates (representing 47 spore families and 33 single isolates) from eight populations across northern Europe (Russia, Finland, and Sweden) were screened with seven microsatellite markers and arbitrary primed polymerase chain reaction with the M13 minisatellite. The two molecular methods generally gave the same pattern for the genetic population structure. There were no significant differences between the observed and the expected heterozygosities, and the inbreeding coefficient (FIS) did not indicate any inbreeding. The fixation index (FST) revealed a general pattern with little to moderate genetic differentiation for the majority of populations, while the southernmost Swedish population Norra Kvill was the only one showing high differentiation from about half of the other populations. Swedish population Fiby with the shortest distance to the continuous habitat was moderately differentiated from most of the others and to the largest extent differed from geographically closest population of Norra Kvill. The results indicate that the fragmentation of old-growth forest in Russia and Finland is more recent than the fragmentation in Sweden, and the genetic population structures of P. centrifuga in northern Europe might be related to differences in forest landscape dynamics between the two areas.
担子菌离心栓菌是一种木材腐朽真菌,是未受管理的老龄云杉林的特征物种,由于森林管理,该栖息地已变得越来越破碎化。本研究的目的是调查离心栓菌在连续和破碎化栖息地中的遗传种群结构,并估计破碎化对该真菌遗传多样性的潜在影响。使用七个微卫星标记和带有M13小卫星的任意引物聚合酶链反应,对来自北欧(俄罗斯、芬兰和瑞典)八个种群的315个单孢子分离株(代表47个孢子家族和33个单分离株)进行了筛选。这两种分子方法对遗传种群结构的检测结果总体相同。观察到的杂合度与预期杂合度之间没有显著差异,近交系数(FIS)也未表明存在任何近交现象。固定指数(FST)显示出一种总体模式,即大多数种群的遗传分化程度较低至中等,而瑞典最南端的诺拉·奎尔种群是唯一一个与约一半其他种群表现出高度分化的种群。距离连续栖息地最近的瑞典种群菲比与大多数其他种群有中等程度的分化,并且在很大程度上与地理上最接近的诺拉·奎尔种群不同。结果表明,俄罗斯和芬兰老龄森林的破碎化比瑞典更近,北欧离心栓菌的遗传种群结构可能与这两个地区森林景观动态的差异有关。