Nintasen Rungrat, Utrarachkij Fuangfa, Siripanichgon Kanokrat, Bhumiratana Adisak, Suzuki Yasuhiko, Suthienkul Orasa
Department of Microbiology, Faculty of Public Health, Mahidol University, 420/1 Rajvithi Road, Rajthewee, Bangkok 10400, Thailand.
Microbiol Immunol. 2007;51(8):777-85. doi: 10.1111/j.1348-0421.2007.tb03967.x.
The combination of a Legionella pneumophila culture isolation technique and macrophage infectivity potentiator (mip) gene-specific nested polymerase chain reaction (PCR) is pivotal for effective routine use in an environmental water system laboratory. Detection of Legionella organisms in 169 environmental samples was performed by using modified buffered charcoal yeast extract (MBCYE) agar for conventional culture. Nested PCR specific for L. pneumophila was performed using boiled genomic DNA extracts from filtered and Chelex 100-treated water samples, or by using silica-gel membrane spin column-eluted DNA from concentrated pond, canal and river samples. Overall, the nested PCR was twelvefold more sensitive than the culture method. The target amplicons (471 basepairs) of all 4 biochemically characterized L. pneumophila isolates were sequenced. They had homology at the DNA and protein levels to 3' proximity of the mip-coding gene of L. pneumophila deposited in genome databases. EcoRI- or KpnI-digested PCR fragments with expected sizes were also confirmed in all 52 PCR-positive samples that were isolated from cooling towers and condenser drains. Viable but nonculturable L. pneumophila might have been present in 48 PCR-positive samples. This study demonstrates that detection of the genetically stable mip gene by nested PCR with a modified process of water sample preparation can be rapidly and effectively used to enhance isolation of the L. pneumophila taxon from microenvironments.
嗜肺军团菌培养分离技术与巨噬细胞感染增强因子(mip)基因特异性巢式聚合酶链反应(PCR)相结合,对于环境水系统实验室的有效常规应用至关重要。使用改良的缓冲炭酵母提取物(MBCYE)琼脂对169份环境样本进行常规培养,以检测军团菌。对过滤后的水样和经Chelex 100处理的水样的煮沸基因组DNA提取物,或对浓缩池塘、运河和河流样本经硅胶膜旋转柱洗脱的DNA进行嗜肺军团菌特异性巢式PCR。总体而言,巢式PCR的灵敏度比培养方法高12倍。对所有4株经生化鉴定的嗜肺军团菌分离株的目标扩增子(471个碱基对)进行了测序。它们在DNA和蛋白质水平上与基因组数据库中保存的嗜肺军团菌mip编码基因的3'端附近具有同源性。在从冷却塔和冷凝器排水口分离出的所有52个PCR阳性样本中,也证实了具有预期大小的EcoRI或KpnI消化的PCR片段。48个PCR阳性样本中可能存在活的但不可培养的嗜肺军团菌。本研究表明,通过巢式PCR检测基因稳定的mip基因,并采用改良的水样制备方法,可快速有效地用于增强从微环境中分离嗜肺军团菌分类群。