Muralidhara B K, Halpert James R
Department of Pharmacology and Toxicology, University of Texas Medical Branch, Galveston, Texas 77555, USA.
Drug Metab Rev. 2007;39(2-3):539-56. doi: 10.1080/03602530701498182.
Structural plasticity and cooperativity in ligand recognition are two key aspects of the catalytic diversity of cytochrome P450 enzymes. As more mammalian P450 crystal structures have emerged, computational modeling has become a major tool to predict drug metabolism and interactions. There is a need for real solution thermodynamic data to support modeling and crystallographic observations. Using isothermal titration calorimetry (ITC) we successfully evaluated the conformational flexibility of P450 2B4 in binding imidazole inhibitors of different size and chemistry and dissected the stoichiometry and energetics of ligand binding allostery in P450eryF. Thermodynamic signatures obtained by ITC nicely correlated with structural and modeling results. Thus, ITC is a powerful tool to study structure-function relationships in P450s.
结构可塑性和配体识别中的协同性是细胞色素P450酶催化多样性的两个关键方面。随着越来越多的哺乳动物P450晶体结构的出现,计算建模已成为预测药物代谢和相互作用的主要工具。需要真实的溶液热力学数据来支持建模和晶体学观察。我们使用等温滴定量热法(ITC)成功评估了P450 2B4在结合不同大小和化学性质的咪唑抑制剂时的构象灵活性,并剖析了P450eryF中配体结合变构的化学计量和能量学。ITC获得的热力学特征与结构和建模结果很好地相关。因此,ITC是研究P450中结构-功能关系的有力工具。