Reddy A Srinivas, Zipse Hendrik, Sastry G Narahari
Molecular Modeling Group, Indian Institute of Chemical Technology, Tarnaka, Hyderabad 500 007, India.
J Phys Chem B. 2007 Oct 4;111(39):11546-53. doi: 10.1021/jp075768l. Epub 2007 Sep 12.
In the present work, we address an apparent disparity in the structural parameters of the X-ray structures and theoretical models of cation-pi complexes in biological and chemical recognition. Hydrated metal ion (Li+, Na+, K+, Mg2+, Ca2+) complexes with benzene (cation-pi) are considered as model systems to perform quantum mechanical calculations in evaluating the geometrical parameters and interaction energies of these complexes. The computations disclose that there is a variation in the structural parameters as well as in the interaction energies of these complexes with the multiple additions of water molecules. The distance between the cation and the pi-system increases with the addition of water molecules, delineating the influence of solvent or the neighborhood atoms on the structural parameters of cation-pi systems present in crystal structures.
在本研究中,我们探讨了生物和化学识别中阳离子-π复合物的X射线结构与理论模型在结构参数上的明显差异。水合金属离子(Li⁺、Na⁺、K⁺、Mg²⁺、Ca²⁺)与苯的复合物(阳离子-π)被视为模型体系,用于进行量子力学计算,以评估这些复合物的几何参数和相互作用能。计算结果表明,随着水分子的多次添加,这些复合物的结构参数以及相互作用能都存在变化。阳离子与π体系之间的距离随着水分子的添加而增加,这描绘了溶剂或邻近原子对晶体结构中阳离子-π体系结构参数的影响。