Arendt Yvonne, Banci Lucia, Bertini Ivano, Cantini Francesca, Cozzi Roberta, Del Conte Rebecca, Gonnelli Leonardo
ProtEra S.r.l., Via delle Idee 22, 50019 Sesto Fiorentino (FI), Italy.
FEBS Lett. 2007 Oct 2;581(24):4723-6. doi: 10.1016/j.febslet.2007.08.069. Epub 2007 Sep 6.
The solution structure of the catalytic domain of MMP-20, a member of the matrix metalloproteinases family not yet structurally characterized, complexed with N-Isobutyl-N-(4-methoxyphenylsulfonyl)glycyl hydroxamic acid (NNGH), is here reported and compared with other MMPs-NNGH adducts. The backbone dynamic has been characterized as well. We have found that, despite the same fold and very high overall similarity, the present structure experiences specific structural and dynamical similarities with some MMPs and differences with others, around the catalytic cavity. The present solution structure, not only contributes to fill the gap of structural knowledge on human MMPs, but also provides further information to design more selective and efficient inhibitors for a specific member of this class of proteins.
基质金属蛋白酶家族中尚未进行结构表征的成员MMP-20催化结构域与N-异丁基-N-(4-甲氧基苯基磺酰基)甘氨酰异羟肟酸(NNGH)复合后的溶液结构在此报道,并与其他MMP-NNGH加合物进行比较。同时也对主链动力学进行了表征。我们发现,尽管具有相同的折叠方式和非常高的整体相似性,但目前的结构在催化腔周围与一些MMPs存在特定的结构和动力学相似性,与其他MMPs则存在差异。目前的溶液结构不仅有助于填补人类MMPs结构知识的空白,还为设计针对这类蛋白质特定成员的更具选择性和高效性的抑制剂提供了进一步的信息。