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N-乙酰-L-亮氨酸-N'-甲基酰胺的构象偏好。对模型二肽的气相和溶液计算。

Conformational preferences of N-acetyl-L-leucine-N'-methylamide. Gas-phase and solution calculations on the model dipeptide.

作者信息

Masman Marcelo F, Lovas Sandor, Murphy Richard F, Enriz Ricardo D, Rodríguez Ana M

机构信息

Departamento de Química, Universidad Nacional de San Luis, Chacabuco 917, 5700 San Luis, Argentina.

出版信息

J Phys Chem A. 2007 Oct 25;111(42):10682-91. doi: 10.1021/jp0716886. Epub 2007 Sep 21.

Abstract

A DFT study of N-acetyl-l-leucine-N'-methylamide conformers in the gas phase and in solution was carried out. The theoretical computational analysis revealed 43 different conformations at the B3LYP/6-31G(d) level of theory in the gas phase. In addition, the effects of three solvents (water, acetonitrile, and chloroform) were included in the calculations using the isodensity polarizable continuum model (IPCM) and the Poisson-Boltzmann self-consistent reaction field (PB-SCRF) method. The stability order of the different conformers in solution has been analyzed. The theoretical results were compared with some experimental data (X-ray, IR, and NMR).

摘要

对气相和溶液中N-乙酰基-L-亮氨酸-N'-甲基酰胺构象异构体进行了密度泛函理论(DFT)研究。理论计算分析表明,在气相中,在B3LYP/6-31G(d)理论水平下有43种不同的构象。此外,使用等密度极化连续介质模型(IPCM)和泊松-玻尔兹曼自洽反应场(PB-SCRF)方法,在计算中考虑了三种溶剂(水、乙腈和氯仿)的影响。分析了溶液中不同构象异构体的稳定性顺序。将理论结果与一些实验数据(X射线、红外光谱和核磁共振)进行了比较。

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