Jobby Maroor K, Sharma Yogendra
Center for Cellular and Molecular Biology, Hyderabad 500007, India.
Biochemistry. 2007 Oct 30;46(43):12298-307. doi: 10.1021/bi700843q. Epub 2007 Oct 4.
The betagamma-crystallin superfamily comprises members from various taxa and species, which have similar domain topologies as that of lens beta- and gamma-crystallins. We have studied new microbial members of this understudied betagamma-crystallin superfamily from the bacterium Caulobacter crescentus. These proteins, which we named "caulollins", are paralogues with a single betagamma-crystallin domain, made up of two Greek key motifs with AB-type arrangement seen in gamma-crystallin. The second Greek key motif has Cys in place of a generally conserved Phe/Tyr residue, and the Tyr corner, considered important for the proper betagamma-crystallin fold, is missing, making this a sequentially diverse atypical betagamma-crystallin domain. This atypical domain binds two Ca2+ with moderate affinity (0.8-20 microM). In apo form, caulollins are partially unstructured proteins and gain structure upon binding Ca2+. Unlike many other microbial betagamma-crystallin domains, this domain is monomeric, though in the presence of Ca2+ it becomes more compact. Ca2+ binding increases the intrinsic stability of proteins, suggesting the role of Ca2+ as an extrinsic stabilizer. N-Terminal extension does not play any role in modulating Ca2+ binding, intrinsic stability, or oligomerization. We noted that there are several such variant domains in the genomes of unrelated species. It appears that caulollins along with these members form a subfamily in the betagamma-crystallin superfamily that would be partially unstructured in apo form, unlike many other domains from lens or microbial crystallins. This work further suggests that Ca2+ binding is a widespread feature of the betagamma-crystallin superfamily.
βγ-晶状体蛋白超家族包含来自不同分类群和物种的成员,它们具有与晶状体β-和γ-晶状体蛋白相似的结构域拓扑结构。我们研究了新月柄杆菌中这个研究较少的βγ-晶状体蛋白超家族的新微生物成员。这些蛋白质,我们将其命名为“柄杆菌晶蛋白”,是具有单个βγ-晶状体蛋白结构域的旁系同源物,由γ-晶状体蛋白中所见的具有AB型排列的两个希腊钥匙基序组成。第二个希腊钥匙基序中,半胱氨酸取代了通常保守的苯丙氨酸/酪氨酸残基,并且被认为对βγ-晶状体蛋白正确折叠很重要的酪氨酸转角缺失,这使得它成为一个序列多样的非典型βγ-晶状体蛋白结构域。这个非典型结构域以中等亲和力(0.8 - 20微摩尔)结合两个钙离子。在无辅基形式下,柄杆菌晶蛋白是部分无结构的蛋白质,在结合钙离子后获得结构。与许多其他微生物βγ-晶状体蛋白结构域不同,这个结构域是单体的,不过在钙离子存在的情况下它会变得更加紧凑。钙离子结合增加了蛋白质的内在稳定性,表明钙离子作为外在稳定剂的作用。N端延伸在调节钙离子结合、内在稳定性或寡聚化方面不起任何作用。我们注意到在不相关物种的基因组中有几个这样的变体结构域。似乎柄杆菌晶蛋白与这些成员在βγ-晶状体蛋白超家族中形成一个亚家族,与晶状体或微生物晶状体蛋白的许多其他结构域不同,其无辅基形式将是部分无结构的。这项工作进一步表明钙离子结合是βγ-晶状体蛋白超家族的一个普遍特征。