Zhao Bin, Wang Chun, Zhao Shulei, Qin Mei, Zhou Zhengyu, Sun Yuxi
College of Chemistry, Qufu Normal University, Shandong, Qufu 273165, PR China.
Spectrochim Acta A Mol Biomol Spectrosc. 2008 Jul;70(2):301-6. doi: 10.1016/j.saa.2007.08.009. Epub 2007 Aug 19.
Eleven possible conformers of glycylglycine have been studied by using the BLYP, B3LYP methods of density functional theory and the HF method at the basis set of 6-311++G**. BLYP (using Becke's and Lee-Yang-Parr's correlation functionals), ab initio Hartree-Fock (HF) and hybrid DFT/HF B3LYP calculations have been carried out to study the structure and vibrational spectra of glycylglycine. Glycylglycine crystal structure has been determined by X-ray diffraction analysis. The title compound has been crystallizes in the orthorhombic space group C1, with Z=4. And the unit cell parameters are: a=8.1184(12)A, b=9.5542(14)A, c=7.8192(11)A and V=577.95(15)A(3). Molecular conformation calculations have got 11 possible conformers. In these possible conformers, the most stable one has been selected. The BLYP/6-311++G** and scaled HF/6-311++G** frequencies correspond well with available experimental assignments of the normal vibrational modes. Comparison of the observed fundamental vibrational frequencies of glycylglycine and calculated results by density functional B3LYP and Hartree-Fock (HF) methods indicates that B3LYP is superior to the scaled Hartree-Fock (HF) for molecular vibrational issues.
利用密度泛函理论的BLYP、B3LYP方法以及HF方法,在6-311++G基组水平上对甘氨酰甘氨酸的11种可能构象进行了研究。采用BLYP(使用Becke和Lee-Yang-Parr相关泛函)、从头算Hartree-Fock(HF)以及混合DFT/HF B3LYP计算方法,研究了甘氨酰甘氨酸的结构和振动光谱。通过X射线衍射分析确定了甘氨酰甘氨酸的晶体结构。标题化合物结晶于正交晶系空间群C1中,Z = 4。晶胞参数为:a = 8.1184(12)Å,b = 9.5542(14)Å,c = 7.8192(11)Å,V = 577.95(15)ų。分子构象计算得到了11种可能的构象。在这些可能的构象中,选取了最稳定的一种。BLYP/6-311++G和缩放后的HF/6-311++G**频率与正常振动模式的现有实验归属吻合良好。甘氨酰甘氨酸的观测基本振动频率与密度泛函B3LYP和Hartree-Fock(HF)方法的计算结果比较表明,在分子振动问题上,B3LYP优于缩放后的Hartree-Fock(HF)方法。