Lorin Aurélien, Lins Laurence, Stroobant Vincent, Brasseur Robert, Charloteaux Benoit
Gembloux Agricultural University, Centre de Biophysique Moléculaire Numérique, 2 Passage des déportés, B-5030 Gembloux, Belgium.
J Pept Sci. 2008 Apr;14(4):423-8. doi: 10.1002/psc.949.
We had previously predicted successfully the minimal fusion peptides (FPs) of the human immunodeficiency virus 1 (HIV-1) gp41 and the bovine leukemia virus (BLV) gp30 using an original approach based on the obliquity/fusogenicity relationship of tilted peptides. In this paper, we have used the same method to predict the shortest FP capable of inducing optimal fusion in vitro of the simian immunodeficiency virus (SIV) mac isolate and of other SIVs and human immunodeficiency virus (HIV-2) isolates. In each case, the 11-residue-long peptide was predicted as the minimal FP. For the SIV mac isolate, liposome lipid-mixing and leakage assays confirmed that this peptide is the shortest peptide inducing optimal fusion in vitro, being therefore the minimal FP. These results are another piece of evidence that the tilted properties of FPs are important for the fusion process and that our method can be used to predict the minimal FPs of other viruses.
我们之前使用一种基于倾斜肽的倾斜度/融合活性关系的原创方法,成功预测了人类免疫缺陷病毒1型(HIV-1)gp41和牛白血病病毒(BLV)gp30的最小融合肽(FPs)。在本文中,我们使用相同的方法预测了能够在体外诱导猿猴免疫缺陷病毒(SIV)mac分离株以及其他SIV和人类免疫缺陷病毒(HIV-2)分离株实现最佳融合的最短FPs。在每种情况下,预测11个氨基酸长的肽为最小FPs。对于SIV mac分离株,脂质体脂质混合和泄漏试验证实该肽是在体外诱导最佳融合的最短肽,因此是最小FPs。这些结果进一步证明了FPs的倾斜特性对融合过程很重要,并且我们的方法可用于预测其他病毒的最小FPs。