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[脊椎动物免疫:突变蛋白及其进化]

[Vertebrate immunity: mutator proteins and their evolution].

作者信息

Lada A G, Iyer L M, Rogozin I B, Aravind L, Pavlov Iu I

出版信息

Genetika. 2007 Oct;43(10):1311-27.

Abstract

M.E. Lobashev has brilliantly postulated in 1947 that error-prone repair contribute to mutations in cells. This was shown to be true once the mechanisms of UV mutagenesis in Escherichia coli were deciphered. Induced mutations are generated during error-prone SOS DNA repair with the involvement of inaccurate DNA polymerases belonging to the Y family. Currently, several distinct mutator enzymes participating in spontaneous and induced mutagenesis have been identified. Upon induction of these proteins, mutation rates increase by several orders of magnitude. These proteins regulate the mutation rates in evolution and in ontogeny during immune response. In jawed vertebrates, somatic hypermutagenesis occurs in the variable regions of immunoglobulin genes, leading to affinity maturation of antibodies. The process is initiated by cytidine deamination in DNA to uracil by AID (Activation-Induced Deaminase). Further repair of uracil-containing DNA through proteins that include the Y family DNA polymerases causes mutations, induce gene conversion, and class switch recombination. In jawless vertebrates, the variable lymphocyte receptors (VLR) serve as the primary molecules for adaptive immunity. Generation of mature VLRs most likely depends on agnathan AID-like deaminases. AID and its orthologs in lamprey (PmCDA1 and PMCDA2) belong to the AID/APOBEC family of RNA/DNA editing cytidine deaminases. This family includes enzymes with different functions: APOBEC1 edits RNA, APOBEC3 restricts retroviruses. The functions of APOBEC2 and APOBEC4 have not been yet determined. Here, we report a new member of the AID/APOBEC family, APOBEC5, in the bacterium Xanthomonas oryzae. The widespread presence of RNA/DNA editing deaminases suggests that they are an ancient means of generating genetic diversity.

摘要

1947年,M.E. 洛巴舍夫出色地提出,易出错修复会导致细胞发生突变。一旦破译了大肠杆菌中紫外线诱变的机制,就证明这是正确的。诱导突变是在易出错的SOS DNA修复过程中产生的,涉及属于Y家族的不准确DNA聚合酶。目前,已经鉴定出几种参与自发和诱导诱变的不同诱变酶。诱导这些蛋白质后,突变率会增加几个数量级。这些蛋白质在进化和免疫反应的个体发育过程中调节突变率。在有颌脊椎动物中,体细胞超突变发生在免疫球蛋白基因的可变区,导致抗体亲和力成熟。该过程由AID(激活诱导脱氨酶)将DNA中的胞嘧啶脱氨为尿嘧啶引发。通过包括Y家族DNA聚合酶在内的蛋白质对含尿嘧啶DNA的进一步修复会导致突变、诱导基因转换和类别转换重组。在无颌脊椎动物中,可变淋巴细胞受体(VLR)是适应性免疫的主要分子。成熟VLR的产生很可能依赖于盲鳗类AID样脱氨酶。AID及其在七鳃鳗中的直系同源物(PmCDA1和PMCDA2)属于RNA/DNA编辑胞嘧啶脱氨酶的AID/APOBEC家族。该家族包括具有不同功能的酶:APOBEC1编辑RNA,APOBEC3限制逆转录病毒。APOBEC2和APOBEC4的功能尚未确定。在这里,我们报告了水稻黄单胞菌中AID/APOBEC家族的一个新成员APOBEC5。RNA/DNA编辑脱氨酶的广泛存在表明它们是产生遗传多样性的古老方式。

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