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甲状腺激素浓度对墨西哥钝口螈(美西螈属)诱导变态所潜在的转录反应的影响

Effect of thyroid hormone concentration on the transcriptional response underlying induced metamorphosis in the Mexican axolotl (Ambystoma).

作者信息

Page Robert B, Voss Stephen R, Samuels Amy K, Smith Jeramiah J, Putta Srikrishna, Beachy Christopher K

机构信息

Department of Biology, University of Kentucky, Lexington, Kentucky 40506 USA .

出版信息

BMC Genomics. 2008 Feb 11;9:78. doi: 10.1186/1471-2164-9-78.

Abstract

BACKGROUND

Thyroid hormones (TH) induce gene expression programs that orchestrate amphibian metamorphosis. In contrast to anurans, many salamanders do not undergo metamorphosis in nature. However, they can be induced to undergo metamorphosis via exposure to thyroxine (T4). We induced metamorphosis in juvenile Mexican axolotls (Ambystoma mexicanum) using 5 and 50 nM T4, collected epidermal tissue from the head at four time points (Days 0, 2, 12, 28), and used microarray analysis to quantify mRNA abundances.

RESULTS

Individuals reared in the higher T4 concentration initiated morphological and transcriptional changes earlier and completed metamorphosis by Day 28. In contrast, initiation of metamorphosis was delayed in the lower T4 concentration and none of the individuals completed metamorphosis by Day 28. We identified 402 genes that were statistically differentially expressed by > or = two-fold between T4 treatments at one or more non-Day 0 sampling times. To complement this analysis, we used linear and quadratic regression to identify 542 and 709 genes that were differentially expressed by > or = two-fold in the 5 and 50 nM T4 treatments, respectively.

CONCLUSION

We found that T4 concentration affected the timing of gene expression and the shape of temporal gene expression profiles. However, essentially all of the identified genes were similarly affected by 5 and 50 nM T4. We discuss genes and biological processes that appear to be common to salamander and anuran metamorphosis, and also highlight clear transcriptional differences. Our results show that gene expression in axolotls is diverse and precise, and that axolotls provide new insights about amphibian metamorphosis.

摘要

背景

甲状腺激素(TH)诱导基因表达程序,从而协调两栖动物的变态发育。与无尾两栖动物不同,许多蝾螈在自然环境中不会经历变态发育。然而,通过暴露于甲状腺素(T4),它们可以被诱导发生变态发育。我们使用5 nM和50 nM的T4诱导幼年墨西哥钝口螈(美西螈)发生变态发育,在四个时间点(第0天、第2天、第12天、第28天)采集头部的表皮组织,并使用微阵列分析来量化mRNA丰度。

结果

在较高T4浓度下饲养的个体更早开始形态和转录变化,并在第28天完成变态发育。相比之下,在较低T4浓度下变态发育的起始被延迟,并且到第28天没有个体完成变态发育。我们鉴定出402个基因,在一个或多个非第0天的采样时间,T4处理之间这些基因的统计学差异表达倍数≥两倍。为补充此分析,我们使用线性和二次回归分别鉴定出在5 nM和50 nM T4处理中差异表达倍数≥两倍的542个和709个基因。

结论

我们发现T4浓度影响基因表达的时间以及时间基因表达谱的形状。然而,基本上所有鉴定出的基因在5 nM和50 nM T4处理下受到的影响相似。我们讨论了蝾螈和无尾两栖动物变态发育中似乎共有的基因和生物学过程,同时也突出了明显的转录差异。我们的结果表明,美西螈中的基因表达是多样且精确的,并且美西螈为两栖动物变态发育提供了新的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9dca/2262897/7f160dda97f4/1471-2164-9-78-1.jpg

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