• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

通过多组展开过程表征的细胞色素c和溶菌酶的全局和局部结构变化。

Global and local structural changes of cytochrome c and lysozyme characterized by a multigroup unfolding process.

作者信息

Shiu Ying-Jen, Jeng U-Ser, Huang Yu-Shan, Lai Ying-Huang, Lu Hsiu-Feng, Liang Chia-Tsen, Hsu I-Jui, Su Chiu-Hun, Su Charlene, Chao Ito, Su An-Chung, Lin Sheng-Hsien

机构信息

Institute of Atomic and Molecular Sciences, Academia Sinica, Taipei 106, Taiwan.

出版信息

Biophys J. 2008 Jun;94(12):4828-36. doi: 10.1529/biophysj.107.124214. Epub 2008 Mar 7.

DOI:10.1529/biophysj.107.124214
PMID:18326641
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2397345/
Abstract

Equilibrium unfolding behaviors of cytochrome c and lysozyme induced by the presence of urea (0-10 M) as well as changes in temperature (295-363 K) or pH (1.8-7) are examined via small-angle x-ray scattering and spectroscopic techniques, including circular dichroism and optical absorption. Denaturant and temperature effects are incorporated into the free energy expression for a general multigroup unfolding process. Results indicate that there are at least four unfolding groups in the temperature-, urea-, or pH-induced unfolding of cytochrome c: two of these are related to the prosthetic heme group, and the other two correspond, respectively, to the unfolding of alpha-helices and global changes in protein morphology that are largely unaccounted for by the first two groups. In contrast, the unfolding of lysozyme approximately follows a simple one-group process. A modified mean-field Ising model is adopted for a coherent description of the unfolding behaviors observed. Thermodynamic parameters extracted from simple denaturing processes, on the basis of the Ising model, can closely predict unfolding behaviors of the proteins in compounded denaturing environments.

摘要

通过小角X射线散射和光谱技术,包括圆二色性和光吸收,研究了尿素(0 - 10 M)存在以及温度(295 - 363 K)或pH值(1.8 - 7)变化时细胞色素c和溶菌酶的平衡去折叠行为。将变性剂和温度效应纳入一般多组去折叠过程的自由能表达式中。结果表明,在温度、尿素或pH诱导的细胞色素c去折叠过程中至少有四个去折叠组:其中两个与辅基血红素基团有关,另外两个分别对应于α螺旋的去折叠和蛋白质形态的整体变化,前两组在很大程度上无法解释这些变化。相比之下,溶菌酶的去折叠大致遵循一个简单的单组过程。采用改进的平均场伊辛模型对观察到的去折叠行为进行连贯描述。基于伊辛模型从简单变性过程中提取的热力学参数可以密切预测蛋白质在复合变性环境中的去折叠行为。

相似文献

1
Global and local structural changes of cytochrome c and lysozyme characterized by a multigroup unfolding process.通过多组展开过程表征的细胞色素c和溶菌酶的全局和局部结构变化。
Biophys J. 2008 Jun;94(12):4828-36. doi: 10.1529/biophysj.107.124214. Epub 2008 Mar 7.
2
Kinetics and motional dynamics of spin-labeled yeast iso-1-cytochrome c: 1. Stopped-flow electron paramagnetic resonance as a probe for protein folding/unfolding of the C-terminal helix spin-labeled at cysteine 102.自旋标记酵母异-1-细胞色素c的动力学和运动动力学:1. 停流电子顺磁共振作为探测在半胱氨酸102处自旋标记的C端螺旋蛋白质折叠/去折叠的探针
Biochemistry. 1997 Mar 11;36(10):2884-97. doi: 10.1021/bi962155i.
3
Folding of horse cytochrome c in the reduced state.还原态马细胞色素c的折叠
J Mol Biol. 2001 Oct 5;312(5):1135-60. doi: 10.1006/jmbi.2001.4993.
4
Structural characterization of an equilibrium unfolding intermediate in cytochrome c.细胞色素c中平衡解折叠中间体的结构表征
J Mol Biol. 2006 Mar 31;357(3):1009-25. doi: 10.1016/j.jmb.2006.01.055. Epub 2006 Feb 3.
5
Partially unfolded equilibrium state of hen lysozyme studied by circular dichroism spectroscopy.通过圆二色光谱研究的鸡溶菌酶部分解折叠平衡态。
Biochemistry. 2000 May 30;39(21):6475-82. doi: 10.1021/bi992560k.
6
A lysozyme folding intermediate revealed by solution X-ray scattering.溶液X射线散射揭示的溶菌酶折叠中间体
J Mol Biol. 1996 Sep 6;261(5):658-71. doi: 10.1006/jmbi.1996.0491.
7
Distribution, transition and thermodynamic stability of protein conformations in the denaturant-induced unfolding of proteins.蛋白质在变性剂诱导的去折叠过程中构象的分布、转变及热力学稳定性
PLoS One. 2014 Mar 6;9(3):e91129. doi: 10.1371/journal.pone.0091129. eCollection 2014.
8
Multistate equilibrium unfolding of Escherichia coli dihydrofolate reductase: thermodynamic and spectroscopic description of the native, intermediate, and unfolded ensembles.大肠杆菌二氢叶酸还原酶的多态平衡去折叠:天然态、中间态和去折叠态系综的热力学和光谱学描述
Biochemistry. 2000 Aug 8;39(31):9540-50. doi: 10.1021/bi000511y.
9
A solution study on the local and global structure changes of cytochrome c: an unfolding process induced by urea.细胞色素c局部和全局结构变化的溶液研究:尿素诱导的去折叠过程
J Phys Chem A. 2007 Sep 27;111(38):9286-90. doi: 10.1021/jp073031q. Epub 2007 Aug 14.
10
Mapping Protein Structural Evolution upon Unfolding.映射蛋白质结构在解折叠过程中的演变。
Biochemistry. 2022 Feb 15;61(4):303-309. doi: 10.1021/acs.biochem.1c00743. Epub 2022 Jan 27.

引用本文的文献

1
Differentiating the solution structures and stability of transthyretin tetramer complexed with tolcapone and tafamidis using SEC-SWAXS and NMR.使用尺寸排阻色谱-小角X射线散射(SEC-SWAXS)和核磁共振(NMR)技术区分与托卡朋和他氟米特复合的转甲状腺素蛋白四聚体的溶液结构和稳定性。
J Appl Crystallogr. 2025 Jul 8;58(Pt 4):1373-1383. doi: 10.1107/S1600576725004716. eCollection 2025 Aug 1.
2
Revealing an origin of temperature-dependent structural change in intrinsically disordered proteins.揭示内在无序蛋白质中温度依赖性结构变化的起源。
Biophys J. 2025 Feb 4;124(3):540-548. doi: 10.1016/j.bpj.2024.12.022. Epub 2024 Dec 24.
3
Activation of Cytochrome C Peroxidase Function Through Coordinated Foldon Loop Dynamics upon Interaction with Anionic Lipids.通过与阴离子脂质相互作用时折叠环构象的协调变化来激活细胞色素 C 过氧化物酶的功能。
J Mol Biol. 2021 Jul 23;433(15):167057. doi: 10.1016/j.jmb.2021.167057. Epub 2021 May 24.
4
Protein-Glass Surface Interactions and Ion Desalting in Electrospray Ionization with Submicron Emitters.蛋白质与玻璃表面的相互作用以及亚微米发射器电喷雾电离中的离子脱盐
J Am Soc Mass Spectrom. 2018 Jan;29(1):194-202. doi: 10.1007/s13361-017-1825-6. Epub 2017 Oct 12.
5
Quenching of TryptophanFluorescence in Unfolded Cytochrome : A Biophysics Experiment for Physical Chemistry Students.未折叠细胞色素中色氨酸荧光的猝灭:面向物理化学专业学生的生物物理实验
J Chem Educ. 2010 Sep 1;87(9):961-964. doi: 10.1021/ed900029c.
6
Thermodynamics of protein folding using a modified Wako-Saitô-Muñoz-Eaton model.使用改进的和光-斋藤-穆尼奥斯-伊顿模型的蛋白质折叠热力学
J Biol Phys. 2012 Sep;38(4):543-71. doi: 10.1007/s10867-012-9271-y. Epub 2012 Jun 21.
7
Model-independent decomposition of two-state data.双态数据的模型无关分解
Phys Rev E Stat Nonlin Soft Matter Phys. 2013 Dec;88(6):062713. doi: 10.1103/PhysRevE.88.062713. Epub 2013 Dec 16.
8
Single-molecule lysozyme dynamics monitored by an electronic circuit.通过电子电路监测溶菌酶的单分子动力学。
Science. 2012 Jan 20;335(6066):319-24. doi: 10.1126/science.1214824.
9
Resonant x-ray scattering and absorption for the global and local structures of Cu-modified metallothioneins in solution.溶液中铜修饰的金属硫蛋白整体和局部结构的共振X射线散射与吸收
Biophys J. 2009 Jul 22;97(2):609-17. doi: 10.1016/j.bpj.2009.05.004.

本文引用的文献

1
A solution study on the local and global structure changes of cytochrome c: an unfolding process induced by urea.细胞色素c局部和全局结构变化的溶液研究:尿素诱导的去折叠过程
J Phys Chem A. 2007 Sep 27;111(38):9286-90. doi: 10.1021/jp073031q. Epub 2007 Aug 14.
2
The folding and evolution of multidomain proteins.多结构域蛋白质的折叠与进化
Nat Rev Mol Cell Biol. 2007 Apr;8(4):319-30. doi: 10.1038/nrm2144. Epub 2007 Mar 14.
3
A unified mechanism for protein folding: predetermined pathways with optional errors.蛋白质折叠的统一机制:具有可选错误的预定途径。
Protein Sci. 2007 Mar;16(3):449-64. doi: 10.1110/ps.062655907.
4
Refinement of multidomain protein structures by combination of solution small-angle X-ray scattering and NMR data.通过溶液小角X射线散射和核磁共振数据相结合来优化多结构域蛋白质结构。
J Am Chem Soc. 2005 Nov 30;127(47):16621-8. doi: 10.1021/ja054342m.
5
Protein folding: the stepwise assembly of foldon units.蛋白质折叠:折叠子单元的逐步组装。
Proc Natl Acad Sci U S A. 2005 Mar 29;102(13):4741-6. doi: 10.1073/pnas.0501043102. Epub 2005 Mar 17.
6
How cytochrome c folds, and why: submolecular foldon units and their stepwise sequential stabilization.细胞色素c如何折叠以及为何如此折叠:亚分子折叠单元及其逐步顺序稳定化
J Mol Biol. 2004 Oct 8;343(1):223-33. doi: 10.1016/j.jmb.2004.08.005.
7
Cytochrome c folding dynamics.细胞色素c折叠动力学。
Curr Opin Chem Biol. 2004 Apr;8(2):169-74. doi: 10.1016/j.cbpa.2004.02.009.
8
Small-angle scattering: a view on the properties, structures and structural changes of biological macromolecules in solution.小角散射:关于溶液中生物大分子的性质、结构及结构变化的见解
Q Rev Biophys. 2003 May;36(2):147-227. doi: 10.1017/s0033583503003871.
9
Competitive model on denaturant-mediated protein unfolding.变性剂介导的蛋白质解折叠竞争模型
Biophys J. 2003 Feb;84(2 Pt 1):770-4. doi: 10.1016/S0006-3495(03)74896-6.
10
Exact solution of the Muñoz-Eaton model for protein folding.蛋白质折叠的穆尼奥斯 - 伊顿模型的精确解。
Phys Rev Lett. 2002 Jun 24;88(25 Pt 1):258101. doi: 10.1103/PhysRevLett.88.258101. Epub 2002 Jun 6.