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通过多组展开过程表征的细胞色素c和溶菌酶的全局和局部结构变化。

Global and local structural changes of cytochrome c and lysozyme characterized by a multigroup unfolding process.

作者信息

Shiu Ying-Jen, Jeng U-Ser, Huang Yu-Shan, Lai Ying-Huang, Lu Hsiu-Feng, Liang Chia-Tsen, Hsu I-Jui, Su Chiu-Hun, Su Charlene, Chao Ito, Su An-Chung, Lin Sheng-Hsien

机构信息

Institute of Atomic and Molecular Sciences, Academia Sinica, Taipei 106, Taiwan.

出版信息

Biophys J. 2008 Jun;94(12):4828-36. doi: 10.1529/biophysj.107.124214. Epub 2008 Mar 7.

Abstract

Equilibrium unfolding behaviors of cytochrome c and lysozyme induced by the presence of urea (0-10 M) as well as changes in temperature (295-363 K) or pH (1.8-7) are examined via small-angle x-ray scattering and spectroscopic techniques, including circular dichroism and optical absorption. Denaturant and temperature effects are incorporated into the free energy expression for a general multigroup unfolding process. Results indicate that there are at least four unfolding groups in the temperature-, urea-, or pH-induced unfolding of cytochrome c: two of these are related to the prosthetic heme group, and the other two correspond, respectively, to the unfolding of alpha-helices and global changes in protein morphology that are largely unaccounted for by the first two groups. In contrast, the unfolding of lysozyme approximately follows a simple one-group process. A modified mean-field Ising model is adopted for a coherent description of the unfolding behaviors observed. Thermodynamic parameters extracted from simple denaturing processes, on the basis of the Ising model, can closely predict unfolding behaviors of the proteins in compounded denaturing environments.

摘要

通过小角X射线散射和光谱技术,包括圆二色性和光吸收,研究了尿素(0 - 10 M)存在以及温度(295 - 363 K)或pH值(1.8 - 7)变化时细胞色素c和溶菌酶的平衡去折叠行为。将变性剂和温度效应纳入一般多组去折叠过程的自由能表达式中。结果表明,在温度、尿素或pH诱导的细胞色素c去折叠过程中至少有四个去折叠组:其中两个与辅基血红素基团有关,另外两个分别对应于α螺旋的去折叠和蛋白质形态的整体变化,前两组在很大程度上无法解释这些变化。相比之下,溶菌酶的去折叠大致遵循一个简单的单组过程。采用改进的平均场伊辛模型对观察到的去折叠行为进行连贯描述。基于伊辛模型从简单变性过程中提取的热力学参数可以密切预测蛋白质在复合变性环境中的去折叠行为。

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