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低聚糖对简单阳离子水合作用的差异效应。

Differential effects of oligosaccharides on the hydration of simple cations.

作者信息

Eriksson Mats, Lindhorst Thisbe K, Hartke Bernd

机构信息

Institut für Physikalische Chemie, Christian-Albrechts-Universität, Olshausenstrasse 40, Kiel, Germany.

出版信息

J Chem Phys. 2008 Mar 14;128(10):105105. doi: 10.1063/1.2873147.

Abstract

Changed ion hydration properties near surfaces, proteins, and deoxyribose nucleic acid have been reported before in the literature. In the present work, we extend this work to carbohydrates: We have performed classical-mechanical molecular dynamics simulations to study solvation properties of simple cations of biological relevance (Na(+),K(+),Mg(2+),Ca(2+)) in explicit water, near single and multiple oligosaccharides as glycocalyx models. We find that our oligosaccharides prefer direct contact with K(+) over Na(+), but that the Na(+) contacts are longer lived. These interactions also lead to strong but short-lived changes in oligosaccharide conformations, with oligosaccharides wrapping around K(+) with multiple contacts. These findings may have implications for current hypotheses on glycocalyx functions.

摘要

文献中此前已报道过靠近表面、蛋白质和脱氧核糖核酸时离子水合特性的变化。在本研究中,我们将这项工作扩展到碳水化合物:我们进行了经典力学分子动力学模拟,以研究具有生物学相关性的简单阳离子(Na⁺、K⁺、Mg²⁺、Ca²⁺)在明确的水中,靠近作为糖萼模型的单糖和多种寡糖时的溶剂化特性。我们发现,我们的寡糖与K⁺的直接接触比与Na⁺的更优先,但Na⁺的接触持续时间更长。这些相互作用还导致寡糖构象发生强烈但短暂的变化,寡糖通过多次接触环绕在K⁺周围。这些发现可能对目前关于糖萼功能的假说有影响。

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