Shah Ronak, Schweitzer-Stenner Reinhard
Department of Bioscience and Biotechnology, Drexel University, Philadelphia, Pennsylvania 19104, USA.
Biochemistry. 2008 May 6;47(18):5250-7. doi: 10.1021/bi702492n. Epub 2008 Apr 12.
To test the validity of the notion that changes in ionic strength and ion binding do not cause any major functionally relevant structural changes in cytochrome c, we measured the absorption and electronic circular dichroism (ECD) of horse heart ferricytochrome c for the Soret and 695 nm charge-transfer band as a function of dihydrogen phosphate and sodium acetate concentrations. This band is known to probe the integrity of the functionally pivotal Fe3+-M80 linkage. Spectral changes indicate that an ionic strength increase (via an increasing acetate ion concentration) affects only a subset of conformational substates of the Fe-M80 interface, probed by the 695 nm charge-transfer band, without a substantial modification of the heme environment. This result suggests that the substates probed by the 695 nm band differ with respect to their capability to transduce changes of solvent-protein interactions to the active site. The binding of H2PO4- ions causes more significant structural changes, which give rise to a large increase of the oscillator strength of the 695 nm band. This reflects a strengthening of the Fe-M80 bond in all substates, which probably destabilizes the oxidized state but stabilizes the folded state of the protein. Additional structural variations are likely to involve aromatic side chains, such as F82 and W59, and the hydrogen-bonding network in the heme pocket. In contrast to the current belief that anion binding to the binding domain of the protein for cytochrome c oxidase does not cause any functionally relevant structural changes, our results show that the structural variations that occur in the heme pocket are most likely of functional significance.
为了验证离子强度和离子结合的变化不会导致细胞色素c发生任何重大的功能相关结构变化这一观点的有效性,我们测量了马心铁细胞色素c在Soret带和695nm电荷转移带处的吸收光谱和电子圆二色性(ECD),作为磷酸二氢盐和醋酸钠浓度的函数。已知该谱带可探测功能关键的Fe3+-M80连接的完整性。光谱变化表明,离子强度增加(通过增加醋酸根离子浓度)仅影响由695nm电荷转移带探测的Fe-M80界面构象亚态的一个子集,而对血红素环境没有实质性改变。这一结果表明,由695nm谱带探测的亚态在将溶剂-蛋白质相互作用的变化传导至活性位点的能力方面存在差异。H2PO4-离子的结合会引起更显著的结构变化,导致695nm谱带的振子强度大幅增加。这反映了所有亚态中Fe-M80键的增强,这可能会使蛋白质的氧化态不稳定,但使折叠态稳定。额外的结构变化可能涉及芳香族侧链,如F82和W59,以及血红素口袋中的氢键网络。与目前认为阴离子与细胞色素c氧化酶蛋白质结合域的结合不会引起任何功能相关结构变化的观点相反,我们的结果表明,血红素口袋中发生的结构变化很可能具有功能意义。