Wang Wenyan, Prosise Winifred W, Chen Jun, Taremi S Shane, Le Hung V, Madison Vincent, Cui Xiaoming, Thomas Ann, Cheng K-C, Lesburg Charles A
Structural Chemistry Department, Schering-Plough Research Institute, Kenilworth, NJ 07033, USA.
Protein Eng Des Sel. 2008 Jul;21(7):425-33. doi: 10.1093/protein/gzn017. Epub 2008 May 2.
The nuclear xenobiotic receptor PXR is a ligand-inducible transcription factor regulating drug-metabolizing enzymes and transporters and a master switch mediating potentially adverse drug-drug interactions. In addition to binding a coactivator protein such as SRC-1, the C-terminal ligand-binding domain (LBD) is solely responsible for ligand recognition and thus the ligand-dependent downstream effects. In an effort to facilitate structural studies of PXR to understand and abolish the interactions between PXR and its ligands, several recombinant PXR/SRC-1 constructs were designed and evaluated for expression, stability and activity. Expression strategies employing either dual expression or translationally coupled bicistronic expression were found to be unsuitable for producing stable PXR in a stochiometric complex with a peptide derived from SRC-1 (SRC-1p). A single polypeptide chain encompassing PXR and SRC-1p tethered with a peptidyl linker was designed to promote intramolecular complex formation. This tethered protein was overexpressed as a soluble protein and required no additional SRC-1p for further stabilization. X-ray crystal structures in the presence and absence of the known PXR agonist SR-12813 were determined to high resolution. In addition, a circular dichroism-based binding assay was developed to allow rapid evaluation of PXR ligand affinity, making this tethered protein a convenient and effective reagent for the rational attenuation of drug-induced PXR-mediated metabolism.
核异生素受体PXR是一种配体诱导型转录因子,可调节药物代谢酶和转运蛋白,是介导潜在不良药物相互作用的主控开关。除了与共激活蛋白如SRC-1结合外,C端配体结合结构域(LBD)单独负责配体识别,从而负责配体依赖性的下游效应。为了促进PXR的结构研究以理解和消除PXR与其配体之间的相互作用,设计并评估了几种重组PXR/SRC-1构建体的表达、稳定性和活性。发现采用双表达或翻译偶联双顺反子表达的策略不适用于在与源自SRC-1的肽(SRC-1p)的化学计量复合物中产生稳定的PXR。设计了一种包含PXR和SRC-1p并通过肽基接头连接的单条多肽链,以促进分子内复合物的形成。这种连接蛋白作为可溶性蛋白被过量表达,并且不需要额外的SRC-1p来进一步稳定。在有和没有已知PXR激动剂SR-12813的情况下,均以高分辨率测定了X射线晶体结构。此外,开发了一种基于圆二色性的结合测定法,以快速评估PXR配体亲和力,使这种连接蛋白成为合理减弱药物诱导的PXR介导的代谢的方便而有效的试剂。