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大型和巨型DNA病毒基因组进化的趋同机制

Convergent mechanisms of genome evolution of large and giant DNA viruses.

作者信息

Filée Jonathan, Chandler Michael

机构信息

Laboratoire Evolution, Génomes et Spéciation, CNRS UPR 9034, Avenue de la Terrasse, 91198 Gif sur Yvette Cedex, France.

出版信息

Res Microbiol. 2008 Jun;159(5):325-31. doi: 10.1016/j.resmic.2008.04.012. Epub 2008 May 10.

Abstract

We have taken advantage of the availability of the genome sequences of a collection of large and giant viruses infecting bacteria (T4 family) and eukaryotes (NCLDV group) to assess some of the evolutionary forces which might have shaped their genomes. Despite having apparently different ancestors, these two groups of viruses are affected by convergent evolutionary forces. Both types of virus probably originated from a simple and ancient viral ancestor with a small subset of 30-35 genes encoding replication and structural proteins. The genome size and diversity of the descendants most likely grew progressively by (i) lineage-specific gene duplications, (ii) lateral gene transfers of cellular genes and (iii) accretion of diverse families of mobile genetic elements. These results argue against the hypothesis that giant viruses derive from a regressive cell.

摘要

我们利用了一组感染细菌的大型和巨型病毒(T4 家族)以及感染真核生物的病毒(NCLDV 组)的基因组序列,来评估一些可能塑造其基因组的进化力量。尽管这两组病毒显然有着不同的祖先,但它们受到趋同进化力量的影响。这两种类型的病毒可能都起源于一个简单而古老的病毒祖先,该祖先具有一小部分编码复制和结构蛋白的 30 - 35 个基因。其后代的基因组大小和多样性很可能通过以下方式逐渐增加:(i)谱系特异性基因复制,(ii)细胞基因的横向基因转移,以及(iii)各种移动遗传元件家族的积累。这些结果与巨型病毒源自退化细胞的假说相悖。

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