Duan Chao-Jun, Jiang Tie-Bin, Li Cui
Key Laboratory of Cancer Proteomics, Ministry of Health of China, Xiangya Hospital, Central South University, Changsha 410008, China.
Zhong Nan Da Xue Xue Bao Yi Xue Ban. 2008 Jun;33(6):468-75.
To screen the effective target sequences of laryngeal carcinoma related gene LCRG1 using RNAi.
PCR site mutation method was used to reconstruct pSuper vector. Five pairs of siRNA sequences designed by siRNA software were annealed and inserted into the reconstructed pSuper vector. The reconstructed pSuper 362,398,432,789,903,and pSuper vectors were transfected into Hela cell lines and selected with the appropriate drugs to get resistant and pool cells, respectively. The colonies were identified by RT-PCR or real-time RT-PCR analysis. The silence effects were observed by cloning formation analysis.
pSuper vector was reconstructed to restore Bgl II restriction enzyme sites using PCR mutation. The RT-PCR or real-time RT-PCR Results of pool clones showed 362, 398, and 432 pool clones all had better effects of LCRG1 gene-silence, especially 362 pool clones. The expression level of LCRG1 mRNA of selected 362 group anti-puromycin clones A2 and A5 was decreased. The Results of clone forming efficiency revealed that the cellular proliferation in A2 of 362 group was significantly higher than that of the vector and control Hela cells (P<0.05).
The reconstructed pSuper vector is successfully constructed. The 362 group has better gene silence and has 2 effective 362 group anti-clones, suggesting that methodology has important values in studYing the function and molecular mechanism of LCRG1.
运用RNA干扰技术筛选喉癌相关基因LCRG1的有效靶序列。
采用PCR位点突变法对pSuper载体进行改造。将siRNA软件设计的5对siRNA序列退火后插入改造后的pSuper载体。将构建好的pSuper 362、398、432、789、903以及pSuper载体分别转染至Hela细胞系,并用相应药物筛选,分别获得抗性细胞株及混合细胞。通过RT-PCR或实时RT-PCR分析对克隆进行鉴定。采用克隆形成分析观察沉默效果。
利用PCR突变成功改造pSuper载体,恢复了Bgl II酶切位点。混合克隆的RT-PCR或实时RT-PCR结果显示,362、398和432混合克隆均对LCRG1基因有较好的沉默效果,其中362混合克隆效果尤为明显。所选362组抗嘌呤霉素克隆A2和A5的LCRG1 mRNA表达水平降低。克隆形成率结果显示,362组A2细胞的增殖能力显著高于载体组及对照Hela细胞(P<0.05)。
成功构建了改造后的pSuper载体。362组具有较好的基因沉默效果,且有2个有效的362组抗克隆,表明该方法在研究LCRG1的功能及分子机制方面具有重要价值。