Hashiguchi Yasuyuki, Nishida Mutsumi
Division of Molecular Marine Biology, Ocean Research Institute, University of Tokyo, Minamidai 1-15-1, Nakano-ku, Tokyo 164-8639, Japan.
Gene. 2009 Jul 15;441(1-2):74-9. doi: 10.1016/j.gene.2008.07.022. Epub 2008 Jul 29.
Fish odorant receptors comprise several distinct families of G protein-coupled receptors. The repertoires of fish vomeronasal receptor family 2 (V2R) genes differ substantially among species, which seems to be related to the different odor sensitivity among fish species. In this study, the number and diversity of V2R genes in a cyprinid fish, bitterling Tanakia lanceolata, were examined by gene cloning and genomic Southern blot analysis. Fifty-six distinct V2R partial sequences were identified by extensive cloning of degenerate PCR fragments. Phylogenetic analysis of the V2R genes in bitterling and other model fishes showed that the bitterling V2Rs were subdivided into eight subfamilies that diverged before the separation of cyprinids and other fishes. Most bitterling V2Rs belonged to two major subfamilies, while only one or a few genes were identified in the remaining six subfamilies. The repertoire of bitterling V2Rs was quite similar to that of zebrafish, although some bitterling-specific gene expansions have also occurred. Based on the genomic Southern blot analysis, the copy number of the bitterling V2R gene was estimated at least 60, similar to the number of V2R genes found in the zebrafish genome. This also suggests that bitterling has relatively larger number of V2R genes than other model fishes.
鱼类嗅觉受体由几个不同的G蛋白偶联受体家族组成。鱼类犁鼻器受体家族2(V2R)基因的组成在不同物种间差异很大,这似乎与鱼类物种间不同的嗅觉敏感性有关。在本研究中,通过基因克隆和基因组Southern印迹分析,检测了一种鲤科鱼类——彩石鳑鲏(Tanakia lanceolata)中V2R基因的数量和多样性。通过对简并PCR片段进行广泛克隆,鉴定出56个不同的V2R部分序列。对彩石鳑鲏和其他模式鱼类的V2R基因进行系统发育分析表明,彩石鳑鲏的V2R可分为8个亚家族,这些亚家族在鲤科鱼类和其他鱼类分化之前就已经分化。大多数彩石鳑鲏的V2R属于两个主要亚家族,而在其余6个亚家族中仅鉴定出一个或少数几个基因。彩石鳑鲏的V2R组成与斑马鱼非常相似,尽管也发生了一些彩石鳑鲏特有的基因扩增。基于基因组Southern印迹分析,估计彩石鳑鲏V2R基因的拷贝数至少为60个,与斑马鱼基因组中发现的V2R基因数量相似。这也表明彩石鳑鲏的V2R基因数量比其他模式鱼类相对更多。