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简单芽孢杆菌生态型的碳源利用模式并未反映出它们对以色列“进化峡谷”生态差异显著的山坡的适应性。

Carbon source utilization patterns of Bacillus simplex ecotypes do not reflect their adaptation to ecologically divergent slopes in 'Evolution Canyon', Israel.

作者信息

Sikorski Johannes, Pukall Rüdiger, Stackebrandt Erko

机构信息

Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH, Braunschweig, Germany.

出版信息

FEMS Microbiol Ecol. 2008 Oct;66(1):38-44. doi: 10.1111/j.1574-6941.2008.00574.x. Epub 2008 Aug 27.

Abstract

The 'Evolution Canyons' I and II in Israel are model habitats to study adaptation and speciation of bacteria in the environment. These canyons represent similar ecological replicates, separated by 40 km, with a strongly sun-exposed and hot 'African' south-facing slope (SFS) vs. a cooler and mesic-lush 'European' north-facing slope (NFS). Previously, among 131 Bacillus simplex isolates, distinct genetic lineages (ecotypes), each specific for either SFS or NFS, were identified, suggesting a temperature-driven slope-specific adaptation. Here, we asked whether the ecological heterogeneity of SFS vs. NFS also affected carbon utilization abilities, as determined using the Biolog assay. Contrary to expectation, a correlation between substrate utilization patterns and the ecological origin of strains was not found. Rather, the patterns split according to the two major phylogenetic lineages each of which contain SFS and NFS ecotypes. We conclude that traits related to the general energy metabolism, as far as assessed here, are neither shaped by the major abiotic features of 'Evolution Canyon', namely solar radiation, temperature, and drought, nor by the soil characteristics. We further conclude that some traits diverge rather neutrally from each other, whereas other, more environmentally related traits are shaped by natural selection and show evolutionary convergence.

摘要

以色列的“进化峡谷”I和II是研究环境中细菌适应性和物种形成的典型栖息地。这些峡谷代表了相似的生态复制品,相距40公里,有一个强烈暴露于阳光且炎热的“非洲”朝南坡(SFS)和一个较凉爽且植被茂盛的“欧洲”朝北坡(NFS)。此前,在131株简单芽孢杆菌分离株中,鉴定出了不同的遗传谱系(生态型),每种生态型都特定于SFS或NFS,这表明存在温度驱动的特定于坡向的适应性。在这里,我们研究了SFS与NFS的生态异质性是否也会影响碳利用能力,这是通过Biolog分析来确定的。与预期相反,未发现底物利用模式与菌株生态起源之间存在相关性。相反,这些模式根据两个主要的系统发育谱系进行划分,每个谱系都包含SFS和NFS生态型。我们得出结论,就此处评估的而言,与一般能量代谢相关的特征既不是由“进化峡谷”的主要非生物特征(即太阳辐射、温度和干旱)塑造的,也不是由土壤特征塑造的。我们进一步得出结论,一些特征彼此之间相当中性地分化,而其他与环境更相关的特征则由自然选择塑造并表现出进化趋同。

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