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下一代DNA测序

Next-generation DNA sequencing.

作者信息

Shendure Jay, Ji Hanlee

机构信息

Department of Genome Sciences, University of Washington, Seattle, Washington 98195-5065, USA.

出版信息

Nat Biotechnol. 2008 Oct;26(10):1135-45. doi: 10.1038/nbt1486.

Abstract

DNA sequence represents a single format onto which a broad range of biological phenomena can be projected for high-throughput data collection. Over the past three years, massively parallel DNA sequencing platforms have become widely available, reducing the cost of DNA sequencing by over two orders of magnitude, and democratizing the field by putting the sequencing capacity of a major genome center in the hands of individual investigators. These new technologies are rapidly evolving, and near-term challenges include the development of robust protocols for generating sequencing libraries, building effective new approaches to data-analysis, and often a rethinking of experimental design. Next-generation DNA sequencing has the potential to dramatically accelerate biological and biomedical research, by enabling the comprehensive analysis of genomes, transcriptomes and interactomes to become inexpensive, routine and widespread, rather than requiring significant production-scale efforts.

摘要

DNA序列代表了一种单一格式,广泛的生物学现象可以投射到这种格式上以进行高通量数据收集。在过去三年中,大规模平行DNA测序平台已广泛可得,将DNA测序成本降低了两个多数量级,并通过将主要基因组中心的测序能力交到个体研究人员手中,使该领域更加普及。这些新技术正在迅速发展,近期的挑战包括开发用于生成测序文库的稳健方案、构建有效的数据分析新方法,以及常常需要重新思考实验设计。下一代DNA测序有潜力极大地加速生物学和生物医学研究,因为它能使对基因组、转录组和相互作用组的全面分析变得廉价、常规且广泛,而不再需要大规模的生产规模努力。

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