Sennhauser Gaby, Grütter Markus G
Department of Biochemistry, University of Zürich, CH-8057 Zürich, Switzerland.
Structure. 2008 Oct 8;16(10):1443-53. doi: 10.1016/j.str.2008.08.010.
The structure of proteins that are difficult to crystallize can often be solved by forming a noncovalent complex with a helper protein--a crystallization "chaperone." Although several such applications have been described to date, their handling usually is still very laborious. A valuable addition to the present repertoire of binding proteins is the recently developed designed ankyrin repeat protein (DARPin) technology. DARPins are built based on the natural ankyrin repeat protein fold with randomized surface residue positions allowing specific binding to virtually any target protein. The broad potential of these binding proteins for X-ray crystallography is illustrated by five cocrystal structures that have been determined recently comprising target proteins from distinct families, namely a sugar binding protein, two kinases, a caspase, and a membrane protein. This article reviews the opportunities of this technology for structural biology and the structural aspects of the DARPin-protein complexes.
难以结晶的蛋白质结构通常可以通过与辅助蛋白(一种结晶“伴侣”)形成非共价复合物来解析。尽管迄今为止已经描述了几种此类应用,但其操作通常仍然非常繁琐。最近开发的设计锚蛋白重复蛋白(DARPin)技术是目前结合蛋白库中的一项有价值的补充。DARPins基于天然锚蛋白重复蛋白折叠构建,其表面残基位置随机化,几乎可以与任何靶蛋白特异性结合。最近确定的五个共晶体结构说明了这些结合蛋白在X射线晶体学方面的广泛潜力,这些结构包含来自不同家族的靶蛋白,即一种糖结合蛋白、两种激酶、一种半胱天冬酶和一种膜蛋白。本文综述了该技术在结构生物学方面的机遇以及DARPin-蛋白质复合物的结构方面。