• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

水溶液中离子振动光谱扩散和氢键动力学的第一性原理理论研究:Cl(-)离子水合壳层中的D2O

A first principles theoretical study of vibrational spectral diffusion and hydrogen bond dynamics in aqueous ionic solutions: D2O in hydration shells of Cl(-) ions.

作者信息

Mallik Bhabani S, Semparithi A, Chandra Amalendu

机构信息

Department of Chemistry, Indian Institute of Technology, Kanpur 208016, India.

出版信息

J Chem Phys. 2008 Nov 21;129(19):194512. doi: 10.1063/1.3006032.

DOI:10.1063/1.3006032
PMID:19026071
Abstract

A theoretical study of vibrational spectral diffusion and hydrogen bond dynamics in aqueous ionic solutions is presented from first principles without employing any empirical potential models. The present calculations are based on ab initio molecular dynamics for trajectory generation and wavelet analysis of the simulated trajectories for time dependent frequency calculations. Results are obtained for two different deuterated aqueous solutions: the first one is a relatively dilute solution of a single Cl(-) ion and the second one is a concentrated solution of NaCl ( approximately 3M) dissolved in liquid D(2)O. It is found that the frequencies of OD bonds in the anion hydration shell, i.e., those which are hydrogen bonded to the chloride ion, have a higher stretch frequency than those in the bulk water. Also, on average, the frequencies of hydration shell OD modes are found to increase with increase in the anion-water hydrogen bond distance. On the dynamical side, when the vibrational spectral diffusion is calculated exclusively for the hydration shell water molecules in the first solution, the dynamics reveals three time scales: a short-time relaxation ( approximately 200 fs) corresponding to the dynamics of intact ion-water hydrogen bonds, a slower relaxation ( approximately 3 ps) corresponding to the lifetimes of chloride ion-water hydrogen bonds, and another longer-time constant ( approximately 20 ps) corresponding to the escape dynamics of water from the anion hydration shell. Existence of such three time scales for hydration shell water molecules was also reported earlier for water containing a single iodide ion using classical molecular dynamics [B. Nigro et al., J. Phys. Chem. A 110, 11237 (2006)]. Hence, the present study confirms the basic results of this earlier work using a different methodology. However, when the vibrational spectral diffusion is calculated over all the OD modes, only two time scales of approximately 150 fs and approximately 2.7 ps are found without the slowest component of approximately 20 ps. This is likely because of the very small weight that the hydration shell water molecules carry to the overall spectral diffusion in the solution containing a single ion. For the concentrated solution also, the slowest component of approximately 20 ps is not found in the spectral diffusion of all water molecules because a distinct separation between the hydration shell and bulk water in terms of their stretch frequencies does not hold at this high concentration regime. The present first principles results are compared with those of the available experiments and classical simulations.

摘要

本文从第一性原理出发,对水合离子溶液中的振动光谱扩散和氢键动力学进行了理论研究,未采用任何经验势模型。当前的计算基于从头算分子动力学来生成轨迹,并对模拟轨迹进行小波分析以进行随时间变化的频率计算。得到了两种不同的氘代水溶液的结果:第一种是单个Cl(-)离子的相对稀溶液,第二种是溶解在液态D₂O中的NaCl浓溶液(约3M)。研究发现,阴离子水合壳层中OD键的频率,即那些与氯离子形成氢键的OD键,其伸缩频率高于本体水中的OD键。此外,平均而言,水合壳层OD模式的频率随阴离子 - 水氢键距离的增加而增加。在动力学方面,当仅对第一种溶液中水合壳层水分子的振动光谱扩散进行计算时,动力学显示出三个时间尺度:对应于完整离子 - 水氢键动力学的短时间弛豫(约200 fs)、对应于氯离子 - 水氢键寿命的较慢弛豫(约3 ps)以及对应于水从阴离子水合壳层逃逸动力学的另一个较长时间常数(约20 ps)。使用经典分子动力学方法,对于含有单个碘离子的水,此前也曾报道过水合壳层水分子存在这样三个时间尺度[B. Nigro等人,《物理化学杂志A》110, 11237 (2006)]。因此,本研究使用不同方法证实了该早期工作的基本结果。然而,当对所有OD模式计算振动光谱扩散时,仅发现了约150 fs和约2.7 ps的两个时间尺度,没有约20 ps这个最慢的成分。这可能是因为在含有单个离子的溶液中,水合壳层水分子对整体光谱扩散的贡献非常小。对于浓溶液,在所有水分子的光谱扩散中也未发现约20 ps这个最慢的成分,因为在这种高浓度体系中,水合壳层和本体水在伸缩频率方面没有明显的区分。将当前的第一性原理结果与现有实验和经典模拟结果进行了比较。

相似文献

1
A first principles theoretical study of vibrational spectral diffusion and hydrogen bond dynamics in aqueous ionic solutions: D2O in hydration shells of Cl(-) ions.水溶液中离子振动光谱扩散和氢键动力学的第一性原理理论研究:Cl(-)离子水合壳层中的D2O
J Chem Phys. 2008 Nov 21;129(19):194512. doi: 10.1063/1.3006032.
2
Vibrational spectral diffusion in supercritical D2O from first principles: an interplay between the dynamics of hydrogen bonds, dangling OD groups, and inertial rotation.基于第一性原理的超临界重水(D2O)中的振动光谱扩散:氢键、悬垂OD基团动力学与惯性旋转之间的相互作用
J Phys Chem A. 2008 Dec 25;112(51):13518-27. doi: 10.1021/jp808089q.
3
Vibrational spectral diffusion and hydrogen bond dynamics in heavy water from first principles.基于第一性原理的重水中的振动光谱扩散与氢键动力学
J Phys Chem A. 2008 Jun 12;112(23):5104-12. doi: 10.1021/jp801405a. Epub 2008 May 21.
4
Water in Hydration Shell of an Iodide Ion: Structure and Dynamics of Solute-Water Hydrogen Bonds and Vibrational Spectral Diffusion from First-Principles Simulations.碘离子水合壳层中的水:溶质 - 水氢键的结构与动力学以及基于第一性原理模拟的振动光谱扩散
J Phys Chem B. 2015 Jul 9;119(27):8561-72. doi: 10.1021/jp510714e. Epub 2015 Jun 30.
5
First-Principles Simulation Study of Vibrational Spectral Diffusion and Hydrogen Bond Fluctuations in Aqueous Solution of N-Methylacetamide.N-甲基乙酰胺水溶液中振动光谱扩散与氢键涨落的第一性原理模拟研究
J Phys Chem B. 2015 Jul 30;119(30):9858-67. doi: 10.1021/acs.jpcb.5b03836. Epub 2015 Jul 20.
6
Structure and dynamics of the hydration shells of the Zn(2+) ion from ab initio molecular dynamics and combined ab initio and classical molecular dynamics simulations.基于从头算分子动力学以及从头算与经典分子动力学相结合的模拟研究锌离子水合壳层的结构与动力学
J Chem Phys. 2010 May 21;132(19):194502. doi: 10.1063/1.3421542.
7
Ultrafast dynamics of hydrogen bond exchange in aqueous ionic solutions.离子水溶液中氢键交换的超快动力学
J Phys Chem B. 2009 Jun 4;113(22):7825-35. doi: 10.1021/jp9016739.
8
Dynamics of halide ion-water hydrogen bonds in aqueous solutions: dependence on ion size and temperature.水溶液中卤离子 - 水氢键的动力学:取决于离子大小和温度。
J Phys Chem B. 2006 May 18;110(19):9674-80. doi: 10.1021/jp057544d.
9
Ab initio molecular dynamics studies of hydrogen bonded structure, molecular motion, and frequency fluctuations of water in the vicinity of azide ions.叠氮离子附近水的氢键结构、分子运动及频率波动的从头算分子动力学研究
J Chem Phys. 2015 Apr 28;142(16):164505. doi: 10.1063/1.4918579.
10
Hydrogen bond and residence dynamics of ion-water and water-water pairs in supercritical aqueous ionic solutions: dependence on ion size and density.超临界水离子溶液中离子-水和水-水对的氢键及驻留动力学:对离子大小和密度的依赖性
J Chem Phys. 2006 Dec 21;125(23):234502. doi: 10.1063/1.2403867.

引用本文的文献

1
Effect of the Hydration Shell on the Carbonyl Vibration in the Ala-Leu-Ala-Leu Peptide.水合壳对丙氨酸-亮氨酸-丙氨酸-亮氨酸肽中羰基振动的影响。
Molecules. 2021 Apr 8;26(8):2148. doi: 10.3390/molecules26082148.
2
Water under Supercritical Conditions: Hydrogen Bonds, Polarity, and Vibrational Frequency Fluctuations from Ab Initio Simulations with a Dispersion Corrected Density Functional.超临界条件下的水:基于含色散校正密度泛函的从头算模拟的氢键、极性和振动频率波动
ACS Omega. 2018 Mar 23;3(3):3453-3462. doi: 10.1021/acsomega.7b02036. eCollection 2018 Mar 31.
3
On the Hydrogen Bond Strength and Vibrational Spectroscopy of Liquid Water.
关于液态水的氢键强度与振动光谱
Sci Rep. 2018 Nov 15;8(1):16888. doi: 10.1038/s41598-018-35357-9.