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乳酸乳球菌噬菌体p2的ORF12晶体结构鉴定出一种卷尺蛋白伴侣。

Crystal structure of ORF12 from Lactococcus lactis phage p2 identifies a tape measure protein chaperone.

作者信息

Siponen Marina, Sciara Giuliano, Villion Manuela, Spinelli Silvia, Lichière Julie, Cambillau Christian, Moineau Sylvain, Campanacci Valérie

机构信息

Architecture et Fonction des Macromolécules Biologiques, UMR 6098 CNRS and Universités d'Aix-Marseille I & II, Campus de Luminy, case 932, 13288 Marseille cedex 09, France.

出版信息

J Bacteriol. 2009 Feb;191(3):728-34. doi: 10.1128/JB.01363-08. Epub 2008 Dec 1.

DOI:10.1128/JB.01363-08
PMID:19047351
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2632072/
Abstract

We report here the characterization of the nonstructural protein ORF12 of the virulent lactococcal phage p2, which belongs to the Siphoviridae family. ORF12 was produced as a soluble protein, which forms large oligomers (6- to 15-mers) in solution. Using anti-ORF12 antibodies, we have confirmed that ORF12 is not found in the virion structure but is detected in the second half of the lytic cycle, indicating that it is a late-expressed protein. The structure of ORF12, solved by single anomalous diffraction and refined at 2.9-A resolution, revealed a previously unknown fold as well as the presence of a hydrophobic patch at its surface. Furthermore, crystal packing of ORF12 formed long spirals in which a hydrophobic, continuous crevice was identified. This crevice exhibited a repeated motif of aromatic residues, which coincided with the same repeated motif usually found in tape measure protein (TMP), predicted to form helices. A model of a complex between ORF12 and a repeated motif of the TMP of phage p2 (ORF14) was generated, in which the TMP helix fitted exquisitely in the crevice and the aromatic patches of ORF12. We suggest, therefore, that ORF12 might act as a chaperone for TMP hydrophobic repeats, maintaining TMP in solution during the tail assembly of the lactococcal siphophage p2.

摘要

我们在此报告烈性乳球菌噬菌体p2的非结构蛋白ORF12的特性,该噬菌体属于长尾噬菌体科。ORF12以可溶性蛋白形式产生,在溶液中形成大的寡聚体(6至15聚体)。使用抗ORF12抗体,我们证实ORF12不存在于病毒粒子结构中,但在裂解周期的后半段被检测到,表明它是一种晚期表达的蛋白。通过单异常衍射解析并在2.9埃分辨率下精修的ORF12结构,揭示了一种以前未知的折叠方式以及其表面存在一个疏水区域。此外,ORF12的晶体堆积形成了长螺旋,其中鉴定出一个疏水的连续缝隙。该缝隙呈现出芳香族残基的重复基序,这与通常在预计形成螺旋的卷尺蛋白(TMP)中发现的相同重复基序一致。构建了ORF12与噬菌体p2的TMP的重复基序(ORF14)之间的复合物模型,其中TMP螺旋精确地契合在ORF12的缝隙和芳香区域中。因此,我们认为ORF12可能作为TMP疏水重复序列的伴侣蛋白,在乳球菌长尾噬菌体p2的尾部组装过程中使TMP保持在溶液中。

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Appl Environ Microbiol. 2008 Nov;74(21):6528-37. doi: 10.1128/AEM.00780-08. Epub 2008 Sep 5.
2
Phage T5 straight tail fiber is a multifunctional protein acting as a tape measure and carrying fusogenic and muralytic activities.噬菌体T5直尾丝是一种多功能蛋白质,起到卷尺的作用,并具有融合和溶壁活性。
J Biol Chem. 2008 May 16;283(20):13556-64. doi: 10.1074/jbc.M800052200. Epub 2008 Mar 17.
3
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J Biol Chem. 2008 Feb 1;283(5):2716-23. doi: 10.1074/jbc.M707533200. Epub 2007 Nov 28.
4
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6
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J Bacteriol. 2006 Jun;188(11):3972-82. doi: 10.1128/JB.00024-06.