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小鼠前神经生长因子的内在结构紊乱

Intrinsic structural disorder of mouse proNGF.

作者信息

Paoletti Francesca, Covaceuszach Sonia, Konarev Peter V, Gonfloni Stefania, Malerba Francesca, Schwarz Elisabeth, Svergun Dmitri I, Cattaneo Antonino, Lamba Doriano

机构信息

SISSA-ISAS, Building Q1, Area Science Park - Basovizza, S.S 14 Km 163.5, 34012 Trieste, Italy.

出版信息

Proteins. 2009 Jun;75(4):990-1009. doi: 10.1002/prot.22311.

Abstract

The unprocessed precursor of the Nerve Growth Factor (NGF), proNGF, has additional functions, besides its initially described role as a chaperone for NGF folding. The precursor protein endows apoptotic and/or neurotrophic properties, in contrast to the mature part. The structural and molecular basis for such distinct activities are presently unknown. Aiming to gain insights into the specific molecular interactions that govern rm-proNGF biological activities versus those of its mature counterpart, a structural study by synchrotron small angle X-ray scattering (SAXS) in solution was carried out. The different binding properties of the two proteins were investigated by surface plasmon resonance (SPR) using, as structural probes, a panel of anti-NGF antibodies and the soluble forms of TrkA and p75(NTR) receptors. SAXS measurements revealed the rm-proNGF to be dimeric and anisometric, with the propeptide domain being intrinsically unstructured. Ab initio reconstructions assuming twofold symmetry generated two types of structural models, a globular "crab-like" and an elongated shape that resulted in equally good fits of the scattering data. A novel method accounting for possible coexistence of different conformations contributing to the experimental scattering pattern, with no symmetry constraints, suggests the "crab-like" to be a more likely proNGF conformation. To exploit the potential of chemical stabilizers affecting the existing conformational protein populations, SAXS data were also collected in the presence of ammonium sulphate. An increase of the proNGF compactness was observed. SPR data pinpoints that the propeptide of proNGF may act as an intrinsically unstructured protein domain, characterized by a molecular promiscuity in the interaction/binding to multiple partners (TrkA and p75(NTR) receptors and a panel of neutralizing anti-NGF antibodies) depending on the physiological conditions of the cell. These data provide a first insight into the structural basis for the selectivity of mouse short proNGF, versus NGF, towards its binding partners.

摘要

神经生长因子(NGF)的未加工前体proNGF,除了其最初被描述为NGF折叠伴侣的作用外,还具有其他功能。与成熟部分相比,前体蛋白具有凋亡和/或神经营养特性。目前尚不清楚这种不同活性的结构和分子基础。为了深入了解控制重组人proNGF(rm-proNGF)生物学活性与其成熟对应物的生物学活性的特定分子相互作用,进行了溶液中的同步加速器小角X射线散射(SAXS)结构研究。使用一组抗NGF抗体以及TrkA和p75(NTR)受体的可溶性形式作为结构探针,通过表面等离子体共振(SPR)研究了这两种蛋白质的不同结合特性。SAXS测量表明,rm-proNGF是二聚体且不对称,前肽结构域本质上是无结构的。假设具有双重对称性的从头重建产生了两种类型的结构模型,一种球状的“蟹状”和一种细长形状,它们对散射数据的拟合效果同样良好。一种考虑到可能共存的不同构象对实验散射模式有贡献且无对称性限制的新方法表明,“蟹状”是更可能的proNGF构象。为了利用化学稳定剂影响现有构象蛋白质群体的潜力,还在硫酸铵存在的情况下收集了SAXS数据。观察到proNGF的紧凑性增加。SPR数据指出,proNGF的前肽可能作为一种本质上无结构的蛋白质结构域,其特征在于根据细胞的生理条件在与多个伴侣(TrkA和p75(NTR)受体以及一组中和抗NGF抗体)的相互作用/结合中具有分子混杂性。这些数据首次深入了解了小鼠短proNGF与NGF相比对其结合伴侣的选择性的结构基础。

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