Suppr超能文献

钙调蛋白结构域与CaMKII的钙调蛋白结合结构域相互作用的能量学

Energetics of calmodulin domain interactions with the calmodulin binding domain of CaMKII.

作者信息

Evans T Idil Apak, Shea Madeline A

机构信息

Department of Biochemistry, Roy J. and Lucille A. Carver College of Medicine, University of Iowa, Iowa City, Iowa 52242-1109, USA.

出版信息

Proteins. 2009 Jul;76(1):47-61. doi: 10.1002/prot.22317.

Abstract

Calmodulin (CaM) is an essential eukaryotic calcium receptor that regulates many kinases, including CaMKII. Calcium-depleted CaM does not bind to CaMKII under physiological conditions. However, binding of (Ca(2+))(4)-CaM to a basic amphipathic helix in CaMKII releases auto-inhibition of the kinase. The crystal structure of CaM bound to CaMKIIp, a peptide representing the CaM-binding domain (CaMBD) of CaMKII, shows an antiparallel interface: the C-domain of CaM primarily contacts the N-terminal half of the CaMBD. The two domains of calcium-saturated CaM are believed to play distinct roles in releasing auto-inhibition. To investigate the underlying mechanism of activation, calcium-dependent titrations of isolated domains of CaM binding to CaMKIIp were monitored using fluorescence anisotropy. The binding affinity of CaMKIIp for the domains of CaM increased upon saturation with calcium, with the C-domain having a 35-fold greater affinity than the N-domain. Because the interdomain linker of CaM regulates calcium-binding affinity and contribute to conformational change, the role of each CaM domain was explored further by investigating effects of CaMKIIp on site-knockout mutants affecting the calcium-binding sites of a single domain. Investigation of the thermodynamic linkage between saturation of individual calcium-binding sites and CaM-domain binding to CaMKIIp showed that calcium binding to Sites III and IV was sufficient to recapitulate the behavior of (Ca(2+))(4)-CaM. The magnitude of favorable interdomain cooperativity varied depending on which of the four calcium-binding sites were mutated, emphasizing differential regulatory roles for the domains of CaM, despite the high degree of homology among the four EF-hands of CaM.

摘要

钙调蛋白(CaM)是一种重要的真核生物钙受体,可调节包括CaMKII在内的多种激酶。在生理条件下,钙耗尽的CaM不与CaMKII结合。然而,(Ca²⁺)₄ - CaM与CaMKII中一个碱性两亲性螺旋的结合会解除该激酶的自抑制作用。与CaMKIIp(代表CaMKII的钙调蛋白结合结构域(CaMBD)的肽段)结合的CaM的晶体结构显示出一个反平行界面:CaM的C结构域主要与CaMBD的N端一半接触。钙饱和的CaM的两个结构域被认为在解除自抑制中发挥不同作用。为了研究激活的潜在机制,使用荧光各向异性监测了CaM分离结构域与CaMKIIp结合的钙依赖性滴定。随着钙饱和,CaMKIIp对CaM结构域的结合亲和力增加,C结构域的亲和力比N结构域高35倍。由于CaM的结构域间连接子调节钙结合亲和力并有助于构象变化,通过研究CaMKIIp对影响单个结构域钙结合位点的位点敲除突变体的作用,进一步探索了每个CaM结构域的作用。对单个钙结合位点的饱和与CaM结构域与CaMKIIp结合之间的热力学联系的研究表明,钙与位点III和IV的结合足以重现(Ca²⁺)₄ - CaM的行为。有利的结构域间协同作用的大小取决于四个钙结合位点中的哪一个发生了突变,这强调了CaM结构域的不同调节作用,尽管CaM的四个EF手之间具有高度同源性。

相似文献

2
The Effect of Ca, Lobe-Specificity, and CaMKII on CaM Binding to Na1.1.
Int J Mol Sci. 2018 Aug 23;19(9):2495. doi: 10.3390/ijms19092495.
4
Computational design of calmodulin mutants with up to 900-fold increase in binding specificity.
J Mol Biol. 2009 Feb 6;385(5):1470-80. doi: 10.1016/j.jmb.2008.09.053. Epub 2008 Sep 27.
6
Thermodynamics and conformational change governing domain-domain interactions of calmodulin.
Methods Enzymol. 2009;466:503-26. doi: 10.1016/S0076-6879(09)66021-3. Epub 2009 Nov 13.
7
Opposing Intermolecular Tuning of Ca Affinity for Calmodulin by Neurogranin and CaMKII Peptides.
Biophys J. 2017 Mar 28;112(6):1105-1119. doi: 10.1016/j.bpj.2017.01.020.
8
Thermodynamic linkage between calmodulin domains binding calcium and contiguous sites in the C-terminal tail of Ca(V)1.2.
Biophys Chem. 2011 Nov;159(1):172-87. doi: 10.1016/j.bpc.2011.06.007. Epub 2011 Jun 24.
10
Interactions between domains of apo calmodulin alter calcium binding and stability.
Biochemistry. 1998 Mar 24;37(12):4244-53. doi: 10.1021/bi9718200.

引用本文的文献

1
Nanoscale regulation of Ca dependent phase transitions and real-time dynamics of SAP97/hDLG.
Nat Commun. 2022 Jul 22;13(1):4236. doi: 10.1038/s41467-022-31912-1.
3
Naigating the intricacies of cellular machinery.
J Biol Chem. 2021 Jan-Jun;296:100832. doi: 10.1016/j.jbc.2021.100832. Epub 2021 May 26.
4
Na1.2 EFL domain allosterically enhances Ca binding to sites I and II of WT and pathogenic calmodulin mutants bound to the channel CTD.
Structure. 2021 Dec 2;29(12):1339-1356.e7. doi: 10.1016/j.str.2021.03.002. Epub 2021 Mar 25.
5
Ca-saturated calmodulin binds tightly to the N-terminal domain of A-type fibroblast growth factor homologous factors.
J Biol Chem. 2021 Jan-Jun;296:100458. doi: 10.1016/j.jbc.2021.100458. Epub 2021 Feb 24.
6
The S2-S3 Loop of Kv7.4 Channels Is Essential for Calmodulin Regulation of Channel Activation.
Front Physiol. 2021 Jan 20;11:604134. doi: 10.3389/fphys.2020.604134. eCollection 2020.
7
Structural basis of cytoplasmic NaV1.5 and NaV1.4 regulation.
J Gen Physiol. 2021 Jan 4;153(1). doi: 10.1085/jgp.202012722.
8
Calmodulin binds to the N-terminal domain of the cardiac sodium channel Na1.5.
Channels (Austin). 2020 Dec;14(1):268-286. doi: 10.1080/19336950.2020.1805999.
9
MICAL1 constrains cardiac stress responses and protects against disease by oxidizing CaMKII.
J Clin Invest. 2020 Sep 1;130(9):4663-4678. doi: 10.1172/JCI133181.
10
Neurogranin stimulates Ca2+/calmodulin-dependent kinase II by suppressing calcineurin activity at specific calcium spike frequencies.
PLoS Comput Biol. 2020 Feb 12;16(2):e1006991. doi: 10.1371/journal.pcbi.1006991. eCollection 2020 Feb.

本文引用的文献

1
Role of the N- and C-lobes of calmodulin in the activation of Ca(2+)/calmodulin-dependent protein kinase II.
Biochemistry. 2008 Oct 7;47(40):10587-99. doi: 10.1021/bi8007033. Epub 2008 Sep 17.
6
Crystal structure of apo-calmodulin bound to the first two IQ motifs of myosin V reveals essential recognition features.
Proc Natl Acad Sci U S A. 2006 Dec 19;103(51):19326-31. doi: 10.1073/pnas.0609436103. Epub 2006 Dec 6.
8
Ca2+/calmodulin-dependent protein kinase II (CaMKII) is activated by calmodulin with two bound calciums.
Proc Natl Acad Sci U S A. 2006 Sep 19;103(38):13968-73. doi: 10.1073/pnas.0606433103. Epub 2006 Sep 11.
9
Protein-peptide interaction studies demonstrate the versatility of calmodulin target protein binding.
Protein Pept Lett. 2006;13(5):455-65. doi: 10.2174/092986606776819600.
10
Structure of calmodulin bound to the hydrophobic IQ domain of the cardiac Ca(v)1.2 calcium channel.
Structure. 2005 Dec;13(12):1881-6. doi: 10.1016/j.str.2005.09.021.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验