Latiano A, Palmieri O, Cucchiara S, Castro M, D'Incà R, Guariso G, Dallapiccola B, Valvano M R, Latiano T, Andriulli A, Annese V
Unit of Gastroenterology and Endoscopy, IRCCS, Casa Sollievo della Sofferenza Hospital, Viale Cappuccini 1, San Giovanni Rotondo, Italy.
Am J Gastroenterol. 2009 Jan;104(1):110-6. doi: 10.1038/ajg.2008.3.
Recently, genome-wide association analyses have identified single nucleotide polymorphisms in the IRGM gene (rs1000113 and rs4958847) as strong candidate susceptibility factors for Crohn's disease (CD). The aim of our study was to test whether these variants are associated with inflammatory bowel disease (IBD) in adult- and childhood-onset Italian patients.
Allele and genotype frequencies of rs1000113 and rs4958847 were determined in 823 CD (265 younger than 19 years at diagnosis), 353 ulcerative colitis (UC) (130 younger than 19 years at diagnosis), and 578 controls. Genotype distributions were examined both within IBD clinical sub-phenotypes and CARD15 genotypes.
rs1000113 and rs4958847 were both associated with adult-onset (P=2 x 10(-4); P=2.5 x 10(-3), respectively) and childhood-onset (P=4 x 10(-4); P=8 x 10(-3), respectively) CD cohorts. Similarly, the genotype frequencies remained significantly different for both variants (adult rs1000113, P=1 x 10(-4); rs4958847, P=1 x 10(-3); pediatric rs1000113, P=2.3 x 10(-4); rs4958847, P=9.6 x 10(-3)). At logistic regression, the rs4958847 polymorphism was associated with fistulizing behavior (P=0.037, OR=1.54, CI=1.02-2.31) and perianal fistulas (P=0.045, OR=1.55, CI=1.01-2.38). Conversely, no association with UC and sub-phenotypes was shown.
We replicated the previously reported associations between CD and rs1000113 and rs4958847, confirming that IRGM is a susceptibility locus only for CD, either adult- or early-onset in the Italian population; furthermore, we have also shown its influence on specific clinical features (fistulizing disease).
最近,全基因组关联分析已确定IRGM基因中的单核苷酸多态性(rs1000113和rs4958847)是克罗恩病(CD)的强有力的候选易感因素。我们研究的目的是检验这些变异是否与意大利成年和儿童期发病的炎症性肠病(IBD)相关。
测定了823例CD患者(265例诊断时年龄小于19岁)、353例溃疡性结肠炎(UC)患者(130例诊断时年龄小于19岁)和578名对照者中rs1000113和rs4958847的等位基因和基因型频率。在IBD临床亚表型和CARD15基因型中检查基因型分布。
rs1000113和rs4958847均与成年期发病(P分别为2×10⁻⁴;P为2.5×10⁻³)和儿童期发病(P分别为4×10⁻⁴;P为8×10⁻³)的CD队列相关。同样,这两个变异的基因型频率仍有显著差异(成年rs1000113,P = 1×10⁻⁴;rs4958847,P = 1×10⁻³;儿童rs1000113,P = 2.3×10⁻⁴;rs4958847,P = 9.6×10⁻³)。在逻辑回归分析中,rs4958847多态性与瘘管形成行为相关(P = 0.037,OR = 1.54,CI = 1.02 - 2.31)以及肛周瘘管相关(P = 0.045,OR = 1.55,CI = 1.01 - 2.38)。相反,未显示与UC及其亚表型相关。
我们重复了先前报道的CD与rs1000113和rs4958847之间的关联,证实IRGM仅是意大利人群中成年或早发型CD的一个易感基因座;此外,我们还显示了其对特定临床特征(瘘管形成性疾病)的影响。