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1
Analysis of cytoplasmic mRNA decay in Saccharomyces cerevisiae.酿酒酵母中细胞质mRNA衰变的分析。
Methods Enzymol. 2008;448:409-27. doi: 10.1016/S0076-6879(08)02620-7.
2
The zinc-finger transcription factor Sfp1 imprints specific classes of mRNAs and links their synthesis to cytoplasmic decay.锌指转录因子Sfp1标记特定类别的mRNA，并将它们的合成与细胞质降解联系起来。
Elife. 2024 Oct 2;12:RP90766. doi: 10.7554/eLife.90766.
3
Transcript Buffering: A Balancing Act between mRNA Synthesis and mRNA Degradation.转录本缓冲：mRNA 合成与 mRNA 降解之间的平衡。
Mol Cell. 2018 Oct 4;72(1):10-17. doi: 10.1016/j.molcel.2018.08.023.
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Chapter 1. Methods to study no-go mRNA decay in Saccharomyces cerevisiae.第1章. 酿酒酵母中无义mRNA衰变的研究方法。
Methods Enzymol. 2008;449:3-21. doi: 10.1016/S0076-6879(08)02401-4.
5
The fate of the messenger is pre-determined: a new model for regulation of gene expression.信使的命运是预先确定的：一种基因表达调控的新模型。
Biochim Biophys Acta. 2013 Jun-Jul;1829(6-7):643-53. doi: 10.1016/j.bbagrm.2013.01.004. Epub 2013 Jan 19.
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Global analysis of mRNA decay intermediates in Saccharomyces cerevisiae.在酿酒酵母中对 mRNA 降解中间产物的全局分析。
Proc Natl Acad Sci U S A. 2012 Jul 17;109(29):11764-9. doi: 10.1073/pnas.1119741109. Epub 2012 Jun 29.
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mRNA decay is regulated via sequestration of the conserved 5'-3' exoribonuclease Xrn1 at eisosome in yeast.mRNA 衰变是通过将保守的 5'-3' 外切核酸酶 Xrn1 在酵母中的 eisosome 上进行隔离来调节的。
Eur J Cell Biol. 2017 Sep;96(6):591-599. doi: 10.1016/j.ejcb.2017.05.001. Epub 2017 May 3.
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Measuring mRNA Decay in Budding Yeast Using Single Molecule FISH.使用单分子荧光原位杂交技术测量芽殖酵母中的mRNA衰变
Methods Mol Biol. 2018;1720:35-54. doi: 10.1007/978-1-4939-7540-2_4.
9
Gene expression is circular: factors for mRNA degradation also foster mRNA synthesis.基因表达是循环的：促进 mRNA 降解的因素也促进 mRNA 的合成。
Cell. 2013 May 23;153(5):1000-11. doi: 10.1016/j.cell.2013.05.012.
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Nonsense-containing mRNAs that accumulate in the absence of a functional nonsense-mediated mRNA decay pathway are destabilized rapidly upon its restitution.在缺乏功能性无义介导的mRNA降解途径时积累的含无义密码子的mRNA，在该途径恢复后会迅速变得不稳定。
Mol Cell Biol. 2003 Feb;23(3):842-51. doi: 10.1128/MCB.23.3.842-851.2003.
引用本文的文献
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Hydroxyurea and inactivation of checkpoint kinase MEC1 inhibit transcription termination and pre-mRNA cleavage at polyadenylation sites in budding yeast.羟脲和检查点激酶 MEC1 的失活抑制芽殖酵母中多聚腺苷酸化位点的转录终止和前体 mRNA 切割。
Sci Rep. 2023 Aug 11;13(1):13106. doi: 10.1038/s41598-023-40294-3.
2
Spt6 Association with RNA Polymerase II Directs mRNA Turnover During Transcription.Spt6 与 RNA 聚合酶 II 的结合在转录过程中指导 mRNA 的周转。
Mol Cell. 2018 Jun 21;70(6):1054-1066.e4. doi: 10.1016/j.molcel.2018.05.020.
3
Impact of Methods on the Measurement of mRNA Turnover.方法对 mRNA 周转率测量的影响。
Int J Mol Sci. 2017 Dec 15;18(12):2723. doi: 10.3390/ijms18122723.
4
Measuring mRNA Decay in Budding Yeast Using Single Molecule FISH.使用单分子荧光原位杂交技术测量芽殖酵母中的mRNA衰变
Methods Mol Biol. 2018;1720:35-54. doi: 10.1007/978-1-4939-7540-2_4.
5
Multiplexed gene control reveals rapid mRNA turnover.多重基因调控揭示了 mRNA 的快速周转。
Sci Adv. 2017 Jul 12;3(7):e1700006. doi: 10.1126/sciadv.1700006. eCollection 2017 Jul.
6
Stochastic modeling of biochemical systems with multistep reactions using state-dependent time delay.使用状态依赖时间延迟对具有多步反应的生化系统进行随机建模。
Sci Rep. 2016 Aug 24;6:31909. doi: 10.1038/srep31909.
7
Quantification of pre-mRNA escape rate and synergy in splicing.前体mRNA逃逸率的定量分析及剪接中的协同作用。
Nucleic Acids Res. 2014 Nov 10;42(20):12847-60. doi: 10.1093/nar/gku1014. Epub 2014 Oct 28.
8
The exoribonuclease Dis3L2 defines a novel eukaryotic RNA degradation pathway.核酸外切酶 Dis3L2 定义了一种新型的真核 RNA 降解途径。
EMBO J. 2013 Jul 3;32(13):1842-54. doi: 10.1038/emboj.2013.63. Epub 2013 Mar 15.
9
RNA degradation in Saccharomyces cerevisae.酵母中 RNA 的降解。
Genetics. 2012 Jul;191(3):671-702. doi: 10.1534/genetics.111.137265.
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The AMP-activated protein kinase Snf1 regulates transcription factor binding, RNA polymerase II activity, and mRNA stability of glucose-repressed genes in Saccharomyces cerevisiae.在酿酒酵母中，AMP 激活的蛋白激酶 Snf1 调节葡萄糖抑制基因的转录因子结合、RNA 聚合酶 II 活性和 mRNA 稳定性。
J Biol Chem. 2012 Aug 17;287(34):29021-34. doi: 10.1074/jbc.M112.380147. Epub 2012 Jul 2.
本文引用的文献
1
Endonucleolytic cleavage of eukaryotic mRNAs with stalls in translation elongation.对在翻译延伸过程中出现停滞的真核生物mRNA进行核酸内切裂解。
Nature. 2006 Mar 23;440(7083):561-4. doi: 10.1038/nature04530.
2
Crystal structure and functional analysis of Dcp2p from Schizosaccharomyces pombe.粟酒裂殖酵母Dcp2p的晶体结构与功能分析
Nat Struct Mol Biol. 2006 Jan;13(1):63-70. doi: 10.1038/nsmb1033. Epub 2005 Dec 11.
3
General translational repression by activators of mRNA decapping.mRNA脱帽激活因子引起的普遍翻译抑制
Cell. 2005 Sep 23;122(6):875-86. doi: 10.1016/j.cell.2005.07.012.
4
Global analysis of Pub1p targets reveals a coordinate control of gene expression through modulation of binding and stability.对Pub1p靶点的全局分析揭示了通过调节结合和稳定性对基因表达进行的协同控制。
Mol Cell Biol. 2005 Jul;25(13):5499-513. doi: 10.1128/MCB.25.13.5499-5513.2005.
5
Targeted mRNA degradation by deadenylation-independent decapping.通过非脱腺苷依赖的脱帽作用进行靶向mRNA降解。
Mol Cell. 2004 Jul 2;15(1):5-15. doi: 10.1016/j.molcel.2004.06.028.
6
The enzymes and control of eukaryotic mRNA turnover.真核生物mRNA周转的酶及调控
Nat Struct Mol Biol. 2004 Feb;11(2):121-7. doi: 10.1038/nsmb724.
7
Cytoplasmic degradation of splice-defective pre-mRNAs and intermediates.剪接缺陷型前体mRNA和中间体的细胞质降解
Mol Cell. 2003 Dec;12(6):1453-65. doi: 10.1016/s1097-2765(03)00488-x.
8
Computational modeling and experimental analysis of nonsense-mediated decay in yeast.酵母中无义介导的mRNA降解的计算建模与实验分析
Cell. 2003 May 16;113(4):533-45. doi: 10.1016/s0092-8674(03)00353-2.
9
Analysis of recombinant yeast decapping enzyme.重组酵母去帽酶的分析
RNA. 2003 Feb;9(2):231-8. doi: 10.1261/rna.2151403.
10
Genome-wide screening of Saccharomyces cerevisiae to identify genes required for antibiotic insusceptibility of eukaryotes.对酿酒酵母进行全基因组筛选，以鉴定真核生物抗生素不敏感性所需的基因。
Antimicrob Agents Chemother. 2003 Feb;47(2):676-81. doi: 10.1128/AAC.47.2.676-681.2003.
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