Heifetz Eliyahu M, Fulton Janet E, O'Sullivan Neil P, Arthur James A, Cheng Hans, Wang Jing, Soller Morris, Dekkers Jack C M
Department of Animal Science and Center for Integrated Animal Genomics, Iowa State University, Ames, IA 50011, USA.
BMC Genomics. 2009 Jan 14;10:20. doi: 10.1186/1471-2164-10-20.
Marek's disease (MD) is a T-cell lymphoma of chickens caused by the Marek's disease virus (MDV), an oncogenic avian herpesvirus. MD is a major cause of economic loss to the poultry industry and the most serious and persistent infectious disease concern. A full-sib intercross population, consisting of five independent families was generated by crossing and repeated intercrossing of two partially inbred commercial White Leghorn layer lines known to differ in genetic resistance to MD. At the F6 generation, a total of 1615 chicks were produced (98 to 248 per family) and phenotyped for MD resistance measured as survival time in days after challenge with a very virulent plus (vv+) strain of MDV.
QTL affecting MD resistance were identified by selective DNA pooling using a panel of 15 SNPs and 217 microsatellite markers. Since MHC blood type (BT) is known to affect MD resistance, a total of 18 independent pool pairs were constructed according to family x BT combination, with some combinations represented twice for technical reasons. Twenty-one QTL regions (QTLR) affecting post-challenge survival time were identified, distributed among 11 chromosomes (GGA1, 2, 3, 4, 5, 8, 9, 15, 18, 26 and Z), with about two-thirds of the MD resistance alleles derived from the more MD resistant parental line. Eight of the QTLR associated with MD resistance, were previously identified in a backcross (BC) mapping study with the same parental lines. Of these, 7 originated from the more resistant line, and one from the less resistant line.
There was considerable evidence suggesting that MD resistance alleles tend to be recessive. The width of the QTLR for these QTL appeared to be reduced about two-fold in the F6 as compared to that found in the previous BC study. These results provide a firm basis for high-resolution linkage disequilibrium mapping and positional cloning of the resistance genes.
马立克氏病(MD)是由马立克氏病病毒(MDV)引起的鸡T细胞淋巴瘤,MDV是一种致癌性禽疱疹病毒。MD是家禽业经济损失的主要原因,也是最严重且持续存在的传染病问题。通过对两个已知对MD遗传抗性不同的部分近交商业白来航母鸡品系进行杂交和反复回交,产生了一个由五个独立家系组成的全同胞互交群体。在F6代,共产生了1615只雏鸡(每个家系98至248只),并通过用超强毒(vv +)MDV毒株攻击后以存活天数来衡量MD抗性进行了表型分析。
使用一组15个单核苷酸多态性(SNP)和217个微卫星标记,通过选择性DNA池化法鉴定了影响MD抗性的数量性状基因座(QTL)。由于已知主要组织相容性复合体血型(BT)会影响MD抗性,根据家系×BT组合构建了总共18个独立的池对,出于技术原因,一些组合有两个代表。鉴定出21个影响攻毒后存活时间的QTL区域(QTLR),分布在11条染色体(GGA1、2、3、4、5、8、9、15、18、26和Z)上,约三分之二的MD抗性等位基因来自MD抗性更强的亲本品系。与MD抗性相关的8个QTLR先前在使用相同亲本品系的回交(BC)图谱研究中已被鉴定。其中,7个来自抗性更强的品系,1个来自抗性较弱的品系。
有大量证据表明MD抗性等位基因倾向于隐性。与之前的BC研究相比,这些QTL的QTLR宽度在F6代似乎减少了约两倍。这些结果为抗性基因的高分辨率连锁不平衡图谱绘制和定位克隆提供了坚实基础。