Fukuoka Yutaka, Inaoka Hidenori, Noshiro Makoto
School of Biomedical Science, Tokyo Medical and Dental University, Japan.
Annu Int Conf IEEE Eng Med Biol Soc. 2008;2008:5708-11. doi: 10.1109/IEMBS.2008.4650510.
To detect changes in gene expression data from DNA microarrays, a fixed threshold value is widely used. However, it is not always guaranteed that a threshold value which is appropriate for highly expressed genes is suitable for genes with low expression. In this study, aiming at detecting biologically meaningful changes from a wide range of expression levels, we proposed an adaptive threshold method. The performance of the proposed method was investigated using publicly available expression data.