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Adaptive threshold to detect biologically meaningful changes in microarray data.

作者信息

Fukuoka Yutaka, Inaoka Hidenori, Noshiro Makoto

机构信息

School of Biomedical Science, Tokyo Medical and Dental University, Japan.

出版信息

Annu Int Conf IEEE Eng Med Biol Soc. 2008;2008:5708-11. doi: 10.1109/IEMBS.2008.4650510.

Abstract

To detect changes in gene expression data from DNA microarrays, a fixed threshold value is widely used. However, it is not always guaranteed that a threshold value which is appropriate for highly expressed genes is suitable for genes with low expression. In this study, aiming at detecting biologically meaningful changes from a wide range of expression levels, we proposed an adaptive threshold method. The performance of the proposed method was investigated using publicly available expression data.

摘要

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