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关于5-溴尿嘧啶诱变作用的机制:水簇中尿嘧啶和5-溴尿嘧啶的密度泛函理论研究

On the mechanism of the mutagenic action of 5-bromouracil: a DFT study of uracil and 5-bromouracil in a water cluster.

作者信息

Danilov Victor I, van Mourik Tanja, Kurita Noriyuki, Wakabayashi Hajime, Tsukamoto Takayuki, Hovorun Dmytro M

出版信息

J Phys Chem A. 2009 Mar 19;113(11):2233-5. doi: 10.1021/jp811007j.

Abstract

Density functional theory calculations on the canonical (keto) and rare (enol) tautomeric forms of uracil and 5-bromouracil in a cluster consisting of 50 water molecules are presented. The keto form of uracil is favored over the enol tautomer in both the gas phase and solution. However, the presence of the water cluster reverses the tautomeric preference of 5-bromouracil, rendering the rare tautomeric form to be preferred over the canonical form in aqueous solution. This effect is, to a large extent, due to the more favorable water-water interactions in the cluster around 5-bromouracil and can therefore only be obtained by including explicit water-water interactions in the calculations.

摘要

本文展示了在由50个水分子组成的团簇中,对尿嘧啶和5-溴尿嘧啶的标准(酮式)和罕见(烯醇式)互变异构体进行的密度泛函理论计算。在气相和溶液中,尿嘧啶的酮式异构体都比烯醇互变异构体更稳定。然而,水团簇的存在逆转了5-溴尿嘧啶的互变异构偏好,使得在水溶液中罕见的互变异构体比标准形式更受青睐。这种效应在很大程度上是由于5-溴尿嘧啶周围团簇中更有利的水-水相互作用,因此只有在计算中包含明确的水-水相互作用才能得到这种结果。

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