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在来自不同来源的相关酶的背景下,对植物寄生线虫甜菜孢囊线虫分泌的分支酸变位酶进行结构和功能研究。

Structural and functional investigation of a secreted chorismate mutase from the plant-parasitic nematode Heterodera schachtii in the context of related enzymes from diverse origins.

作者信息

Vanholme Bartel, Kast Peter, Haegeman Annelies, Jacob Joachim, Grunewald Wim, Gheysen Godelieve

机构信息

Molecular Biotechnology Department, Faculty of Bioscience Engineering, Ghent University, Coupure links 653, B-9000 Ghent, Belgium.

出版信息

Mol Plant Pathol. 2009 Mar;10(2):189-200. doi: 10.1111/j.1364-3703.2008.00521.x.

Abstract

In this article, we present the cloning of Hscm1, a gene for chorismate mutase (CM) from the beet cyst nematode Heterodera schachtii. CM is a key branch-point enzyme of the shikimate pathway, and secondary metabolites that arise from this pathway control developmental programmes and defence responses of the plant. By manipulating the plant's endogenous shikimate pathway, the nematode can influence the plant physiology for its own benefit. Hscm1 is a member of the CM gene family and is expressed during the pre-parasitic and parasitic stages of the nematode's life cycle. In situ mRNA hybridization reveals an expression pattern specific to the subventral and dorsal pharyngeal glands. The predicted protein has a signal peptide for secretion in addition to two domains. The N-terminal domain of the mature protein, which is only found in cyst nematodes, contains six conserved cysteine residues, which may reflect the importance of disulphide bond formation for protein stabilization. The C-terminal domain holds a single catalytic site and has similarity to secreted CMs of pathogenic bacteria, classifying HsCM1 as an AroQ(gamma) enzyme. The presumed catalytic residues are discussed in detail, and genetic complementation experiments indicate that the C-terminal domain is essential for enzyme activity. Finally, we show how the modular design of the protein is mirrored in the genomic sequence by the intron/exon organization, suggesting exon shuffling as a mechanism for the evolutionary assembly of this protein.

摘要

在本文中,我们展示了从甜菜孢囊线虫(Heterodera schachtii)中克隆出的分支酸变位酶(CM)基因Hscm1。CM是莽草酸途径的关键分支点酶,该途径产生的次生代谢产物控制着植物的发育程序和防御反应。通过操纵植物的内源性莽草酸途径,线虫可以为自身利益影响植物生理。Hscm1是CM基因家族的成员,在该线虫生命周期的寄生前期和寄生阶段表达。原位mRNA杂交揭示了一种特定于腹侧和背侧咽腺的表达模式。预测的蛋白质除了两个结构域外还有一个分泌信号肽。成熟蛋白的N端结构域仅在孢囊线虫中发现,含有六个保守的半胱氨酸残基,这可能反映了二硫键形成对蛋白质稳定的重要性。C端结构域有一个单一的催化位点,与致病细菌的分泌型CM相似,将HsCM1归类为AroQ(γ)酶。详细讨论了推测的催化残基,遗传互补实验表明C端结构域对酶活性至关重要。最后,我们展示了该蛋白质的模块化设计如何通过内含子/外显子组织反映在基因组序列中,表明外显子重排是该蛋白质进化组装的一种机制。

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