Potamitis Constantinos, Zervou Maria, Katsiaras Vassilis, Zoumpoulakis Panagiotis, Durdagi Serdar, Papadopoulos Manthos G, Hayes Joseph M, Grdadolnik Simona Golic, Kyrikou Ioanna, Argyropoulos Dimitris, Vatougia Georgia, Mavromoustakos Thomas
National Hellenic Research Foundation, Institute of Organic and Pharmaceutical Chemistry, Vas, Constantinou 48, 11635 Athens, Greece.
J Chem Inf Model. 2009 Mar;49(3):726-39. doi: 10.1021/ci800427s.
The conformational properties of AT1 antagonist valsartan have been analyzed both in solution and at the binding site of the receptor. Low energy conformations of valsartan in solution were explored by NMR spectroscopy and molecular modeling studies. The NMR results showed the existence of two distinct and almost isoenergetic conformations for valsartan (cis:trans ratio around the amide bond approximately 40:60) that coalesce at the temperature range of 55-60 degrees C in agreement with previous in solution conformational analysis study (Fang et al. Magn. Reson. Chem. 2007, 45, 929-936). Quantum mechanics and ONIOM calculations revealed that the bulky valsartan substituents actually contribute to stabilization of the transition state for interconversion. In silico docking and Molecular Dynamic studies were applied to study binding of valsartan at the AT1 receptor site models, explicitly solvated and embedded in lipid bilayers and solvent molecules. These studies revealed that the majority of docked poses adopted a trans (major) conformation. Of paramount and maybe biological importance are the MD simulations results which showed that the two acidic groups of valsartan are bridged through LYS199 enabling it for multiple hydrogen bond interactions. In a lipid bilayer environment these interactions are enhanced, designating the important role of lipid bilayers for the better binding of valsartan and its stabilization at the active site.
已在溶液中和受体结合位点分析了AT1拮抗剂缬沙坦的构象性质。通过核磁共振光谱和分子模拟研究探索了缬沙坦在溶液中的低能构象。核磁共振结果表明缬沙坦存在两种不同且几乎等能的构象(酰胺键周围的顺式:反式比例约为40:60),在55-60摄氏度的温度范围内合并,这与之前的溶液构象分析研究一致(Fang等人,《磁共振化学》,2007年,45卷,929-936页)。量子力学和ONIOM计算表明,缬沙坦的庞大取代基实际上有助于互变过渡态的稳定。应用计算机对接和分子动力学研究来研究缬沙坦在AT1受体位点模型上的结合,该模型明确溶剂化并嵌入脂质双层和溶剂分子中。这些研究表明,大多数对接姿势采用反式(主要)构象。最重要且可能具有生物学重要性的是分子动力学模拟结果,该结果表明缬沙坦的两个酸性基团通过LYS199桥接,使其能够进行多种氢键相互作用。在脂质双层环境中,这些相互作用增强,表明脂质双层对于缬沙坦更好地结合及其在活性位点的稳定具有重要作用。