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通过多重连接依赖探针扩增分析改进对韩国VHL患者种系突变的检测

Improved detection of germline mutations in Korean VHL patients by multiple ligation-dependent probe amplification analysis.

作者信息

Cho Hyun-Jung, Ki Chang-Seok, Kim Jong-Won

机构信息

Department of Laboratory Medicine, Konyang Univeristy Hospital, College of Medical Science, Konyang University, Daejon, Korea.

出版信息

J Korean Med Sci. 2009 Feb;24(1):77-83. doi: 10.3346/jkms.2009.24.1.77. Epub 2009 Feb 28.

Abstract

von Hippel-Lindau (VHL) disease is an autosomal dominant inherited tumor syndrome characterized by the development of tumors in the eye, brain, spinal cord, inner ear, adrenal gland, pancreas, kidney, and epididymis, associated with germline mutations in the VHL gene. We used sequentially sequencing method and multiple ligation-dependent probe amplification (MLPA) analysis and detected germline mutations in the VHL in 15/15 (100%) of VHL patients fulfilling the clinical criteria. Of the 15 distinct mutations detected, large deletions were detected in 5/15 (33.3%) patients, including 4/15 (26.7%) partial deletions and 1/15 (6.6%) deletion of the entire VHL gene by MLPA and the remainder were point mutations detected by sequencing method, of which five mutations were novel. Using MLPA analysis, we detected large deletions including both partial deletions and complete gene deletion, which has not been reported in Korean VHL patients. In conclusion, sequential application of sequencing method and MLPA analysis might make possible to identify germline mutations in most patients with VHL.

摘要

冯·希佩尔-林道(VHL)病是一种常染色体显性遗传性肿瘤综合征,其特征为在眼、脑、脊髓、内耳、肾上腺、胰腺、肾脏和附睾中发生肿瘤,与VHL基因的种系突变相关。我们采用顺序测序法和多重连接依赖探针扩增(MLPA)分析,在符合临床标准的15例VHL患者中,检测到15/15(100%)的患者存在VHL种系突变。在检测到的15种不同突变中,5/15(33.3%)的患者检测到大片段缺失,其中4/15(26.7%)为部分缺失,1/15(6.6%)通过MLPA检测到整个VHL基因缺失,其余为通过测序法检测到的点突变,其中5种突变为新发现的突变。通过MLPA分析,我们检测到包括部分缺失和完全基因缺失在内的大片段缺失,这在韩国VHL患者中尚未见报道。总之,顺序应用测序法和MLPA分析可能使大多数VHL患者的种系突变得以鉴定。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c390/2650969/aed3f82afa50/jkms-24-77-g001.jpg

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